Integrate documentation to RTD (#29)

Author: EmilieDel

.readthedocs.yml

@@ -0,0 +1,19 @@
+version: 2
+
+formats: []
+
+sphinx:
+  builder: html
+  configuration: docs/conf.py
+
+build:
+    image: latest
+
+python:
+  version: 3.7
+  install:
+    - method: pip
+      path: .
+      extra_requirements:
+        - docs
+  system_packages: true

README.md

@@ -7,6 +7,8 @@
  
 <a href="https://github.com/BlueBrain/Atlas-Download-Tools/actions/workflows/run-tests.yml"><img src="https://github.com/BlueBrain/Atlas-Download-Tools/actions/workflows/run-tests.yml/badge.svg?branch=main" alt="Build status" /></a>
 &emsp;
+<a href='https://atlas-download-tools.readthedocs.io/en/latest/?badge=latest'><img src='https://readthedocs.org/projects/atlas-download-tools/badge/?version=latest' alt='Documentation Status' /></a>
+&emsp;
 <a href="https://github.com/psf/black"><img src="https://img.shields.io/badge/code%20style-black-000000.svg" alt="Black"></a>
 <a href="https://pycqa.github.io/isort/"><img src="https://img.shields.io/badge/%20imports-isort-%231674b1?style=flat&labelColor=ef8336" alt="Isort"></a>
 <a href="http://www.pydocstyle.org/"><img src="https://img.shields.io/badge/docstrings-pydocstyle-informational" alt="Pydocstyle"></a>

requirements.txt

@@ -15,102 +15,30 @@
 # You should have received a copy of the GNU Lesser General Public License
 # along with this program.  If not, see <https://www.gnu.org/licenses/>.
 
-aiohttp==3.7.4
-allensdk==2.11.2
-appdirs==1.4.4
-argschema==2.0.2
-async-timeout==3.0.1
-attrs==21.2.0
-bandit==1.7.0
-black==21.5b1
-boto3==1.17.21
-botocore==1.20.79
-certifi==2020.12.5
-chardet==4.0.0
+certifi==2021.5.30
+charset-normalizer==2.0.4
 click==8.0.1
-coverage==5.5
 cycler==0.10.0
-decorator==4.4.2
-distlib==0.3.1
-distro==1.5.0
-filelock==3.0.12
-flake8==3.9.2
-future==0.18.2
-gitdb==4.0.7
-GitPython==3.1.17
-Glymur==0.8.19
-h5py==2.10.0
-hdmf==2.4.0
-idna==2.10
+idna==3.2
 imageio==2.9.0
-importlib-metadata==4.0.1
-iniconfig==1.1.1
-isort==5.8.0
-Jinja2==2.11.3
-jmespath==0.10.0
-jsonschema==3.2.0
+importlib-metadata==4.6.3
 kiwisolver==1.3.1
-MarkupSafe==2.0.1
-marshmallow==3.0.0rc6
 matplotlib==3.4.2
-mccabe==0.6.1
-multidict==5.1.0
-mypy-extensions==0.4.3
-ndx-events==0.2.0
-nest-asyncio==1.2.0
-networkx==2.5.1
-numexpr==2.7.3
-numpy==1.20.3
-opencv-python==4.5.2.52
-packaging==20.9
-pandas==0.25.3
-pathspec==0.8.1
-patsy==0.5.1
-pbr==5.6.0
-Pillow==8.2.0
-pluggy==0.13.1
-psycopg2-binary==2.8.6
-py==1.10.0
-pycodestyle==2.7.0
-pydocstyle==6.1.1
-pyflakes==2.3.1
-pynrrd==0.4.2
-pynwb==1.5.0
+networkx==2.6.2
+numpy==1.21.1
+opencv-python==4.5.3.56
+pandas==1.3.1
+Pillow==8.3.1
 pyparsing==2.4.7
-pyrsistent==0.17.3
-pytest==6.2.4
-pytest-cov==2.12.0
-pytest-mock==3.6.1
-python-dateutil==2.8.1
+python-dateutil==2.8.2
 pytz==2021.1
 PyWavelets==1.1.1
-PyYAML==5.4.1
-regex==2021.4.4
-requests==2.25.1
-requests-toolbelt==0.9.1
-ruamel.yaml==0.17.4
-ruamel.yaml.clib==0.2.2
-s3transfer==0.3.7
-scikit-build==0.11.1
-scikit-image==0.16.2
-scipy==1.6.3
-seaborn==0.11.1
-semver==2.13.0
-SimpleITK==2.0.2
-simplejson==3.17.2
+requests==2.26.0
+scikit-image==0.18.2
+scipy==1.7.1
 six==1.16.0
-smmap==4.0.0
-snowballstemmer==2.1.0
-statsmodels==0.12.2
-stevedore==3.3.0
-tables==3.6.1
-toml==0.10.2
-tox==3.23.1
-tqdm==4.61.0
-typed-ast==1.4.3
+tifffile==2021.7.30
 typing-extensions==3.10.0.0
-urllib3==1.26.4
-virtualenv==20.4.7
-xarray==0.15.1
-yarl==1.6.3
-zipp==3.4.1
+urllib3==1.26.6
+zipp==3.5.0
+