Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Dot plots of putative mitogenomes vs final mitogenomes #90

Open
mahesh-panchal opened this issue Mar 6, 2024 · 0 comments
Open

Dot plots of putative mitogenomes vs final mitogenomes #90

mahesh-panchal opened this issue Mar 6, 2024 · 0 comments

Comments

@mahesh-panchal
Copy link
Collaborator

We're not sure why the putative mitogenomes are as they are. Having dot plots helps see things like repeats clearly etc and is complementary to coverage information.

Take the list of putative mitogenomes and make a dot plot vs the final chosen one.
Options include:

  • Mummer
  • blast
  • dotlet
  • dgeneis
  • etc
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@mahesh-panchal