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Hi, all! I am trying to install MuDataSeurat through remotes/devtools/local but all come across with following error. Can you help me out whether there's some issue on the package?
devtools::install_local("/project/simmons_hts/jpark/0_tools/MuDataSeurat")
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
Enter one or more numbers, or an empty line to skip updates:
── R CMD build ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/tmp/RtmpS48If7/file100063617daa2/MuDataSeurat/DESCRIPTION’ (352ms)
─ preparing ‘MuDataSeurat’:
✔ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
─ building ‘MuDataSeurat_0.0.0.9000.tar.gz’
Installing package into ‘/ceph/home/j/jpark/R/x86_64-pc-linux-gnu-library/4.4’
(as ‘lib’ is unspecified)
installing source package ‘MuDataSeurat’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error in packageVersion(getPackageName()) :
could not find function "packageVersion"
Error: unable to load R code in package ‘MuDataSeurat’
Execution halted
ERROR: lazy loading failed for package ‘MuDataSeurat’
removing ‘/ceph/home/j/jpark/R/x86_64-pc-linux-gnu-library/4.4/MuDataSeurat’
Warning message:
In i.p(...) :
installation of package ‘/tmp/RtmpS48If7/file1000632f58bfc1/MuDataSeurat_0.0.0.9000.tar.gz’ had non-zero exit status
The text was updated successfully, but these errors were encountered:
It seems to complain about packageVersion() not being available. Does it happen in RStudio? Is this function available in vanilla R?
I cannot reproduce this when using R CLI.
Dear MuDataSeurat team,
Hi, all! I am trying to install MuDataSeurat through remotes/devtools/local but all come across with following error. Can you help me out whether there's some issue on the package?
devtools::install_local("/project/simmons_hts/jpark/0_tools/MuDataSeurat")
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?
1: All
2: CRAN packages only
3: None
4: jsonlite (1.8.9 -> 1.9.0 ) [CRAN]
5: tinytex (0.54 -> 0.56 ) [CRAN]
6: xfun (0.50 -> 0.51 ) [CRAN]
7: curl (6.2.0 -> 6.2.1 ) [CRAN]
8: data.table (1.16.4 -> 1.17.0) [CRAN]
9: zoo (1.8-12 -> 1.8-13) [CRAN]
10: spam (2.11-0 -> 2.11-1) [CRAN]
11: uwot (0.2.2 -> 0.2.3 ) [CRAN]
12: reticulate (1.40.0 -> 1.41.0) [CRAN]
13: hdf5r (1.3.11 -> 1.3.12) [CRAN]
Enter one or more numbers, or an empty line to skip updates:
── R CMD build ──────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/tmp/RtmpS48If7/file100063617daa2/MuDataSeurat/DESCRIPTION’ (352ms)
─ preparing ‘MuDataSeurat’:
✔ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
─ building ‘MuDataSeurat_0.0.0.9000.tar.gz’
Installing package into ‘/ceph/home/j/jpark/R/x86_64-pc-linux-gnu-library/4.4’
(as ‘lib’ is unspecified)
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Error in packageVersion(getPackageName()) :
could not find function "packageVersion"
Error: unable to load R code in package ‘MuDataSeurat’
Execution halted
ERROR: lazy loading failed for package ‘MuDataSeurat’
Warning message:
In i.p(...) :
installation of package ‘/tmp/RtmpS48If7/file1000632f58bfc1/MuDataSeurat_0.0.0.9000.tar.gz’ had non-zero exit status
The text was updated successfully, but these errors were encountered: