From 1452c3abb672638788376b7e668da3ef3bd7d129 Mon Sep 17 00:00:00 2001 From: Taylor Salo Date: Tue, 19 Mar 2024 12:01:19 -0400 Subject: [PATCH] Prepare for 0.6.4 release (#1095) --- .versions.json | 46 +++++++++++++++++++++++++++------------------- CITATION.cff | 4 ++-- docs/changes.md | 23 +++++++++++++++++++++++ 3 files changed, 52 insertions(+), 21 deletions(-) diff --git a/.versions.json b/.versions.json index a754e8801..5b7faa151 100644 --- a/.versions.json +++ b/.versions.json @@ -1,23 +1,31 @@ { "flagged": { - "0.0.1": "Denoised BOLD data contained interpolated volumes.", - "0.0.2": "Denoised BOLD data contained interpolated volumes.", - "0.0.3": "Denoised BOLD data contained interpolated volumes.", - "0.0.4": "Denoised BOLD data contained interpolated volumes.", - "0.0.5": "Denoised BOLD data contained interpolated volumes.", - "0.0.6": "Denoised BOLD data contained interpolated volumes.", - "0.0.7": "Denoised BOLD data contained interpolated volumes.", - "0.0.8": "Denoised BOLD data contained interpolated volumes.", - "0.0.9": "Denoised BOLD data contained interpolated volumes.", - "0.1.0": "Denoised BOLD data contained interpolated volumes.", - "0.1.1": "Denoised BOLD data contained interpolated volumes.", - "0.1.2": "Denoised BOLD data contained interpolated volumes.", - "0.1.3": "Denoised BOLD data contained interpolated volumes.", - "0.2.0": "Denoised BOLD data contained interpolated volumes.", - "0.2.1": "Denoised BOLD data contained interpolated volumes.", - "0.2.2": "Denoised BOLD data contained interpolated volumes.", - "0.3.0": "Denoised BOLD data contained interpolated volumes.", - "0.3.1": "Denoised BOLD data contained interpolated volumes.", - "0.3.2": "Denoised BOLD data contained interpolated volumes." + "0.0.1": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.2": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.3": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.4": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.5": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.6": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.7": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.8": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.0.9": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.1.0": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.1.1": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.1.2": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.1.3": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.2.0": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.2.1": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.2.2": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.3.0": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.3.1": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.3.2": "Denoised BOLD data contained interpolated volumes. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.4.0": "Cubic spline interpolation + temporal filtering introduced extreme values at beginning and end of scans. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.5.0": "Cubic spline interpolation + temporal filtering introduced extreme values at beginning and end of scans. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.5.1": "Cubic spline interpolation + temporal filtering introduced extreme values at beginning and end of scans. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.5.2": "Cubic spline interpolation + temporal filtering introduced extreme values at beginning and end of scans. Temporal filtering may have reintroduced variance from nuisance regression.", + "0.6.0": "Temporal filtering may have reintroduced variance from nuisance regression.", + "0.6.1": "Temporal filtering may have reintroduced variance from nuisance regression.", + "0.6.2": "Temporal filtering may have reintroduced variance from nuisance regression.", + "0.6.3": "Temporal filtering may have reintroduced variance from nuisance regression." } } diff --git a/CITATION.cff b/CITATION.cff index 94affd62a..42fd15794 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -86,5 +86,5 @@ keywords: - BIDS-App - Neuroimaging license: BSD-3-Clause -version: 0.6.3 -date-released: '2024-03-08' +version: 0.6.4 +date-released: '2024-03-19' diff --git a/docs/changes.md b/docs/changes.md index 9afcd430c..5a367e1a9 100644 --- a/docs/changes.md +++ b/docs/changes.md @@ -1,5 +1,28 @@ # What's New +## 0.6.4 + +### 🎉 Exciting New Features + +* Replace `bids:xcp_d:` BIDS URI with `bids::` by @tsalo in https://github.com/PennLINC/xcp_d/pull/1088 + +### 👎 Deprecations + +* [DCAN] Enable DCAN QC by default by @tsalo in https://github.com/PennLINC/xcp_d/pull/1086 + +### 🐛 Bug Fixes + +* Raise error if atlas affines don't match across participants by @tsalo in https://github.com/PennLINC/xcp_d/pull/1075 +* Fix query error report in `collect_mesh_data` by @tsalo in https://github.com/PennLINC/xcp_d/pull/1092 +* Adopt Lindquist-compliant denoising method by @tsalo in https://github.com/PennLINC/xcp_d/pull/1087 + +### Other Changes + +* Update changelog for 0.6.3 by @tsalo in https://github.com/PennLINC/xcp_d/pull/1079 + +**Full Changelog**: https://github.com/PennLINC/xcp_d/compare/0.6.3...0.6.4 + + ## 0.6.3 ### 🎉 Exciting New Features