0.7.1rc3

What's Changed

Other Changes

• Adopt Nipreps-style Config object by @tsalo in #1040
• Use pytest-env to capture warnings on CI runs by @tsalo in #1107

Full Changelog: 0.7.0...0.7.1rc3

0.7.1rc2

What's Changed

Other Changes

• Adopt Nipreps-style Config object by @tsalo in #1040

Full Changelog: 0.7.0...0.7.1rc2

0.7.1rc1

What's Changed

Other Changes

• Adopt Nipreps-style Config object by @tsalo in #1040

Full Changelog: 0.7.0...0.7.1rc1

0.7.0

This is a large, backwards-incompatible release. The changes in this release mostly stem from reviewer comments on the XCP-D manuscript.

I expect to release 0.7.1, which will add the NiPreps Config object, very soon.

What's Changed

🛠 Breaking Changes

• [DCAN] Remove --dcan-qc parameter by @tsalo in #1096
• Bring outputs up to date with BEPs 11, 12, 17, and 38 by @tsalo in #1065
• Stop appending "xcp_d" to output directory by @tsalo in #1061

🎉 Exciting New Features

• Create reformatted BrainSwipes figures for HBCD QC by @tsalo in #1091

Other Changes

• Add information about ReHo to read-the-docs by @kahinimehta in #1097
• Update landing page figure by @kahinimehta in #1099
• Add band over censored volumes in executive summary carpet plots by @tsalo in #1077
• Fix image link by @psychelzh in #1100

Full Changelog: 0.6.4...0.7.0

0.7.0rc1

What's Changed

🛠 Breaking Changes

• [DCAN] Remove --dcan-qc parameter by @tsalo in #1096
• Bring outputs up to date with BEPs 11, 12, 17, and 38 by @tsalo in #1065
• Stop appending "xcp_d" to output directory by @tsalo in #1061

Other Changes

• Add information about ReHo to read-the-docs by @kahinimehta in #1097
• Update landing page figure by @kahinimehta in #1099
• Add band over censored volumes in executive summary carpet plots by @tsalo in #1077

Full Changelog: 0.6.4...0.7.0rc1

0.6.4

What's Changed

🎉 Exciting New Features

• Replace bids:xcp_d: BIDS URI with bids:: by @tsalo in #1088

👎 Deprecations

• [DCAN] Enable DCAN QC by default by @tsalo in #1086

🐛 Bug Fixes

• Raise error if atlas affines don't match across participants by @tsalo in #1075
• Fix query error report in collect_mesh_data by @tsalo in #1092
• Adopt Lindquist-compliant denoising method by @tsalo in #1087

Other Changes

• Update changelog for 0.6.3 by @tsalo in #1079

Full Changelog: 0.6.3...0.6.4

0.6.3

What's Changed

🎉 Exciting New Features

• Make "DatasetType" key recommended, not required by @tsalo in #1068

🐛 Bug Fixes

• Do not warn if fd-thresh and min-time are both set to 0 by @tsalo in #1071
• Use copy_atlas to write out atlas tsv and json files by @tsalo in #1073
• Raise error if FS_LICENSE environment variable is not an existing file by @tsalo in #1072
• Generate T2w executive summary plots when T1w is also available by @tsalo in #1078

Other Changes

• Add release notes for releases 0.6.1 and 0.6.2 by @tsalo in #1070

Full Changelog: 0.6.2...0.6.3

0.6.2

What's Changed

🐛 Bug Fixes

• Raise interpretable error when no BOLD runs survive minimum-time threshold by @tsalo in #1048
• Address bug with T2w-only processing by @tsalo in #1060
• Use strict file-matching in collect_run_data by @tsalo in #1063
• Fix potential atlas file race condition by @tsalo in #1066

Other Changes

• Make description of smoothing parameter clearer when set to 0 by @psychelzh in #1056

Full Changelog: 0.6.1...0.6.2

0.6.1

What's Changed

🛠 Breaking Changes

• Support ALFF for censored data by @tsalo in #1020
• Move atlases into a subfolder by @tsalo in #1024

🎉 Exciting New Features

• Add colorbar to ALFF and ReHo plots by @tsalo in #1023
• Add options for UK Biobank data by @tsalo in #1022
• Add options to subset atlases by @tsalo in #1034
• Support MCRIBS derivatives by @tsalo in #1029
• Add --stop-on-first-crash option to command-line interface by @tsalo in #1044

🐛 Bug Fixes

• Rescale ALFF based on original BOLD standard deviation by @tsalo in #1033
• Drop dir entity from concatenated filenames by @tsalo in #1037
• Fix dscalar CIFTI generation by @tsalo in #1036
• Fix TR in denoised NIfTI headers by @tsalo in #1038

Other Changes

• Add dependabot Action by @tsalo in #1006
• Update to Python 3.10 by @tsalo in #1016
• Update docker image link by @psychelzh in #1045

New Contributors

• @dependabot made their first contribution in #1007
• @psychelzh made their first contribution in #1045

Full Changelog: 0.6.0...0.6.1

0.6.1rc1

This release adds support for UK Biobank preprocessing derivatives, for the NiCharts project.

What's Changed

🛠 Breaking Changes

• Support ALFF for censored data by @tsalo in #1020
• Move atlases into a subfolder by @tsalo in #1024

🎉 Exciting New Features

• Add colorbar to ALFF and ReHo plots by @tsalo in #1023
• Add options for UK Biobank data by @tsalo in #1022

🐛 Bug Fixes

• Rescale ALFF based on original BOLD standard deviation by @tsalo in #1033

Other Changes

• Add dependabot Action by @tsalo in #1006
• Update to Python 3.10 by @tsalo in #1016

New Contributors

• @dependabot made their first contribution in #1007

Full Changelog: 0.6.0...0.6.1rc1