12.selscan_xpnsl

ls Salmo_ssa*_CIGENE_80geno_Female_MSW_NL.vcf.gz | \
  sed 's/Female_MSW_NL.vcf.gz//' | \
  parallel --jobs 29 '/home/tkess/selscan/bin/linux/selscan --xpnsl --vcf {}Female_MSW_NL.vcf.gz --vcf-ref {}Female_1SW_NL.vcf.gz --out {}Female_1SWMSW_NL '
  
  #norm
  /home/tkess/selscan/bin/linux/norm  --xpnsl --files *Female*QN*xpnsl.out --bp-win --winsize 100000