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2017-12-21 Andy Buckley <andy.buckley@cern.ch>
* Version 1.7.0 release
2017-12-11 Andy Buckley <andy.buckley@cern.ch>
* Add Nentries printout to yodals -v
2017-09-18 Andy Buckley <andy.buckley@cern.ch>
* Patches for ROOT conversion from Robert Hatcher -- thanks!
2017-09-16 Andy Buckley <andy.buckley@cern.ch>
* Add YODA format version annotation, at version 2, and update
YODA reader to use version info and multiline YAML EOF marker.
* Write YODA annotations in YAML with a --- YAML break-line.
2017-09-14 Andy Buckley <andy.buckley@cern.ch>
* Enable compressed writing from Python.
2017-09-13 Andy Buckley <andy.buckley@cern.ch>
* Remove UNUSED macro in favour of anonymous args.
* Enable zipped writing... but only works from C++ so far.
2017-09-11 Andy Buckley <andy.buckley@cern.ch>
* Add HistoBin2D::area(), and provide a default normto=1.0
argument on the Python Histo2D.normalize() method.
2017-09-04 Andy Buckley <andy.buckley@cern.ch>
* Change license explicitly to GPLv3, cf. MCnet3 agreement.
* Parse YODA format AO headers as YAML (restriction to single-line dict entries for now).
2017-08-24 Andy Buckley <andy.buckley@cern.ch>
* Use a slightly enhanced fast numeric parser in ReaderYODA (taken
from LHAPDF, originally inspired by Gavin Salam).
* Add an UNSCALE spec option to yodascale, to undo ScaledBy effects.
2017-08-19 Andy Buckley <andy.buckley@cern.ch>
* Add optional zlib support via zstr -- massive thanks to Dmitry
Kalinkin for the lovely patch!
2017-08-16 Andy Buckley <andy.buckley@cern.ch>
* Fix setVal(i, x) numbered-axis methods on Point2D and Point3D:
switch break statements were missing.
* Explicitly load all ROOT objects as a list rather than
generator. Patch from Dmitry Kalinkin.
2017-07-24 Andy Buckley <andy.buckley@cern.ch>
* Improvements to yodaplot, including two operating modes: the
default CMP mode is suitable for plotting histos by path, from raw
.yoda files.
* Update yoda.plotting functions to treat plot-keys as args and AO
annotations via case-insensitive keys.
* Add annotationsDict to the Python AO interface.
* Add AO as an alias for AnalysisObject.
2017-07-23 Andy Buckley <andy.buckley@cern.ch>
* Add parallel/compatibility yoda1 package to aid eventual transition to YODA v2.
2017-07-22 Andy Buckley <andy.buckley@cern.ch>
* Add x,y,zMins and Maxs to all 1D data types and scatters (and
x,yMin/Max to the scatters) -- Python interface only.
* Rework some of the yoda.plotting tools, making it a bit more
compatible with user-scripted matplotlib.
2017-07-18 Andy Buckley <andy.buckley@cern.ch>
* Add convenience aliases H1D, H2D, P1D, P2D, and S1D, S2D, S3D
for the HistoXD, ProfileXD, and ScatterXD classes respectively.
2017-07-08 Andy Buckley <andy.buckley@cern.ch>
* Add xyVals/Errs and other 'bin array property' accessors to the
Python Histo1D and Profile1D types: important for connection to
matplotlib.
2017-06-28 Andy Buckley <andy.buckley@cern.ch>
* Use Python natsort library to sort yodals output if available.
2017-06-18 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.7 release.
2017-05-12 Andy Buckley <andy.buckley@cern.ch>
* pyext/yoda/rootcompat.pyx: Fix ordering of TH1 vs. TProfile
conversion -- TProfile *is* a TH1, so we have to test for the more
specific type-match first. Thanks to Dmitry Kalinkin for the
patch.
2017-05-02 Andy Buckley <andy.buckley@cern.ch>
* Add static Reader methods to match the Writer ones.
2017-02-23 Andy Buckley <andy.buckley@cern.ch>
* Fix Histo2D and Profile2D total distribution reading from YODA format.
2017-02-19 Holger Schulz <holger.schulz@durham.ac.uk>
* Convert TH1F to TH1D in root2flat. Much simpler than duplicating
the TH1D stuff in pyext.
2016-12-13 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.6 release.
2016-12-12 Holger Schulz <holger.schulz@durham.ac.uk>
* Bugfixes in Cython bins accessors for Histo2D.
2016-11-17 Leif Lonnblad <leif.lonnblad@thep.lu.se>
* Fixed warning messages about the obsoleteness of AIDA so that the scripts actually still work.
2016-09-28 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.5 release, for the benefit of ROOT fans.
* Fix handling of --enable/disable-root configure options.
2016-09-26 David Grellscheid <david.grellscheid@durham.ac.uk>
* Improvements to Cython version testing.
2016-09-25 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.4 release.
2016-09-20 David Grellscheid <david.grellscheid@durham.ac.uk>
* Remove aliases for @property functions. They were scheduled for
removal anyway, and don't work with Cython >= 24.
2016-09-06 Andy Buckley <andy.buckley@cern.ch>
* Update configure scripts to use newer (Py3-safe) Python testing
macros.
2016-08-09 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.3 release!
2016-07-22 Andy Buckley <andy.buckley@cern.ch>
* Add 'add' modes for scatter combination to yodamerge.
* Fix yodamerge scatter averaging to use the first AO.
2016-07-21 Andy Buckley <andy.buckley@cern.ch>
* Add --type-mismatch-mode flag and fallback logic to yodamerge.
* Fix yodamerge logic to handle cases where an AO only appears once.
2016-07-19 Andy Buckley <andy.buckley@cern.ch>
* Deprecate flat2yoda script and add warning output to it and the AIDA conversion scripts.
* Add a convenience yoda2yoda script.
2016-07-14 Andy Buckley <andy.buckley@cern.ch>
* Try to build PyROOT interface by default, if root-config is found.
2016-07-11 Andy Buckley <andy.buckley@cern.ch>
* Remove accidentally remaining reference to Boost flags in yoda-config.
2016-07-06 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.2 release!
2016-07-05 Andy Buckley <andy.buckley@cern.ch>
* Pass the toNewScatter3D() scalebyarea flag to the called toScatter3D() functions.
2016-06-06 Andy Buckley <andy.buckley@cern.ch>
* Re-enable the disabled-for-some-reason Scatter1D combineWith Python mappings.
2016-04-28 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.1 release!
* Add a unit test for annotation handling correctness.
* Fix numerical precision of string storage of floating-point attributes.
* Fix a bug in use of the replacement for lexical_cast.
2016-04-20 Andy Buckley <andy.buckley@cern.ch>
* Version 1.6.0 release!
2016-04-16 Andy Buckley <andy.buckley@cern.ch>
* Extend SFINAE craziness to allow writing of any object
(e.g. smart pointer) that can be dereferenced to something that
has AnalysisObject as its base class... and also to any container
of them! Amazing what you can do with C++11!
2016-04-14 Andy Buckley <andy.buckley@cern.ch>
* Add a few consts to the arguments in Scatter error setting via pairs.
* Fix double-writing of minus errors in WriterYODA for Scatter1D
and Scatter3D. Thanks to Graeme Watt for the report and fix.
2016-04-12 Andy Buckley <andy.buckley@cern.ch>
* Remove Boost dependency and require C++11 compilation.
2016-04-08 Andy Buckley <andy.buckley@cern.ch>
* Add a --guess-prefix flag to yoda-config, cf. fastjet-config.
2015-12-20 Andy Buckley <andy.buckley@cern.ch>
* Change AO uncomputable division and mkScatter operations to
return/set NaN rather than 0 -- behaviour change requires new
major version series 1.6.
2016-03-09 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.9! (oh no, we're out of convenient version number space!!)
2016-03-08 Andy Buckley <andy.buckley@cern.ch>
* Add abs function to eq calculation in yodadiff.
2016-02-29 Andy Buckley <andy.buckley@cern.ch>
* Remove blocking of builds against ROOT6 -- it works fine.
2016-02-16 Andy Buckley <andy.buckley@cern.ch>
* Add a --add option to yodamerge, for simple histo
stacking. Thanks to Chris Gutschow for the patch, although my
spidey sense is tingling...
2015-12-21 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.8!
* Add a rebinning unit test, pytest-rebin.
* Add optional range arguments to rebinBy methods, allowing block
rebinnings to be applied only within a range of (original) bin
indices.
* Add missing root.py submodule file. Oops!
2015-12-20 Andy Buckley <andy.buckley@cern.ch>
* Convert linspace to use multiplication rather than repeated
addition to construct edge values, reducing precision errors.
Thanks to Holger Schulz for the suggestion.
2015-12-15 Andy Buckley <andy.buckley@cern.ch>
* Add xEdges() methods to Axis1D and the Histo1D and Profile1D
that use it. The returned edge lists are finite only, i.e. they do
not contain the +-inf values on the ends of the internal
BinSearcher edges.
2015-12-13 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.7!
* Extend batch-adding in ReaderYODA to include Scatter types.
* Add a match_aos function to Python, for filtering AO lists/dicts
on path patterns and anti-patterns.
2015-12-12 Andy Buckley <andy.buckley@cern.ch>
* Add a flag to yoda2root to change whether the conversion is to
'proper' types or to (more robustly) TGraphAsymmErrors objects.
* Fix accidental use of S2D_MODE flag where S1D_MODE should have
been used, in yodamerge. Thanks again to Radek Podskubka.
* Allow new rebinTo() merging to restrict to a subset of the bin
range, merging the outside bins into the overflow distributions.
2015-12-11 Andy Buckley <andy.buckley@cern.ch>
* Add a rebinTo() method on Axis1D, allowing rebinning to a new
given set of bin edges. Add an explicitly named rebinBy(), and
overloaded rebin() aliases for both, and pass through to Histo1D
and Profile1D APIs. Plus other internal tweaks to binning
functionality... anticipating/fuelling the fundamental rewrite.
2015-12-10 Andy Buckley <andy.buckley@cern.ch>
* Improve ReaderYODA to use temporary bin containers, to minimise
calling sort when adding bins to histos. A quick test suggests
this has sped up big file reading by a factor of 30 or so!!!
* Add missing addBins() operators (only in C++ so far) to Histo
and Profile classes.
* Fix Counter::numEntries to return an unsigned long rather than double.
Thanks to Radek Podskubka for the bug discovery and detective work.
* Improve sortedvector to insert new elements into the sorted
position, rather than resorting the whole vector. This should be a
bit more efficient, but I think the asymptotic complexity is the
same. Might help a bit with reading big data files.
2015-12-04 Andy Buckley <andy.buckley@cern.ch>
* Add yoda.HAS_ROOT_SUPPORT flag, for API user convenience.
2015-11-22 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.6!
* Make AO path setting and retrieval prepend a leading slash if it
is missing (unless the path is completely empty).
2015-11-21 Andy Buckley <andy.buckley@cern.ch>
* Add root2yoda conversion script.
* Deprecating yoda.to_root() in favour of yoda.root module, which
contains to_root and to_yoda functions, as well as a ROOT file
walking function.
2015-11-17 Andy Buckley <andy.buckley@cern.ch>
* Map ROOT-to-YODA (as scatter) functions to Python. Phew.
* Map new to-ROOT functions, including TGraph ones, to Python.
2015-11-16 Andy Buckley <andy.buckley@cern.ch>
* ROOTCnv.h: Add toScatter3D ROOT->YODA, and toNew* YODA->ROOT
conversion routines.
* ROOTCnv.h: Fix bug in toTH2D(const Histo2D& h) as used with
ROOT6. Thanks to Tim Martin.
2015-11-05 Andy Buckley <andy.buckley@cern.ch>
* Fix double-dealloc in new Point class hierarchy Python mapping.
2015-10-23 Andy Buckley <andy.buckley@cern.ch>
* Make the version() function inline, and the numerical constants static.
* Change the default plotting backend to MPL rather than the much slower PGF.
2015-10-09 Andy Buckley <andy.buckley@cern.ch>
* Reinstate __getitem__ special methods for Scatters in Python.
* Provide dim() methods/attributes for the Point and Bin base classes.
* Rename set*Err to set*Errs for the asymmetric variants. Plural
aliases are also provided for the symm case.
2015-10-08 Andy Buckley <andy.buckley@cern.ch>
* Pass std::pairs by reference in Point*D error setting functions.
* Add Point base class with generic accessors to Point*D
properties via an integer axis ID argument.
2015-10-07 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.5 release.
* Counter.pyx: Typo fix in sumW mapping.
* yodamerge: Re-add checking for non-emptiness before merging, in
case the empty ones are missing a ScaledBy attribute. Won't
normally apply to Profiles, since they don't usually get
normalised, but we might as well include them in the vetoing since
empty histos don't contribute to the merging. Added a command-line
option to disable this heuristic since in very strange situations
a null sumW does not mean no fills.
2015-10-06 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.4 release.
* ReaderYODA: Typo fixes in Counter filling of sumW and Scatter3D reader state flag.
* yodamerge: add merging heuristics for Scatter1D and Scatter3D (needs unification)
2015-10-05 Andy Buckley <andy.buckley@cern.ch>
* yodamerge: add a fix for empty-in-all-runs histo merging; thanks
to Daniel Rauch.
2015-10-04 Andy Buckley <andy.buckley@cern.ch>
* Adding dim() function and corresponding Python attribute to AnalysisObject.
* Map Counter arithmetic operations into Python.
* Map Counter mkScatter() into Python (as bound method).
* Add a YODA::version() function, mapped into Python and used to
set the yoda.__version__ variable.
2015-10-01 Andy Buckley <andy.buckley@cern.ch>
* Expose the yoda.plot() Python function in a way that doesn't
automatically induce a dependence on matplotlib.
2015-09-30 Andy Buckley <andy.buckley@cern.ch>
* Fix yodals to work with Counters.
2015-09-23 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.3 release.
* Update Boost version requirement to 1.48, due to use of
type_traits/has_dereference, and add a check for that feature's
header.
2015-09-19 Andy Buckley <andy.buckley@cern.ch>
* Further improvements to handling leading _multiple_ # marks on
YODA format BEGIN lines.
2015-09-11 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.2 release.
* Tolerate leading # symbols without separating whitespace on
BEGIN lines in YODA format parsing.
* Further improvements to handling LowStatsErrors in YODA format writing.
* Fix shadowed variables that made ReaderYODA unhappy.
2015-09-03 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.1 release.
* Fix bugs in Python wrapper for Point3D.
2015-08-28 Peter Richardson <Peter.Richardson@durham.ac.uk>
* Catch LowStatsError when writing multiple histograms so only the
histogram with the problem is not written
2015-08-28 Andy Buckley <andy.buckley@cern.ch>
* Version 1.5.0 release.
2015-08-24 Andy Buckley <andy.buckley@cern.ch>
* Improve protection of efficiency calculation against the weird
world of general weighted events.
2015-08-17 Andy Buckley <andy.buckley@cern.ch>
* Add some protection against calling matplotlib's legend() method
if there are no valid labels to display, to suppress an MPL
warning message when using yoda.plot().
2015-08-12 Andy Buckley <andy.buckley@cern.ch>
* Fix cut & paste typo, and add LowStatsError catching in Profile division.
2015-08-11 Andy Buckley <andy.buckley@cern.ch>
* Replace old Spirit-based ReaderYODA with the new hand-rolled one.
* Adding filling of Histo1D, Profile1D, Histo2D and Profile2D in
new ReaderYODA. More hacking of Axis and Histo/Profile
interfaces... needs clean-up, and infinite binning implementation.
2015-08-07 Andy Buckley <andy.buckley@cern.ch>
* Convert the ReaderFLAT parser to also use a simple hand-written parser rather than Spirit.
2015-08-04 Andy Buckley <andy.buckley@cern.ch>
* Add methods for Counter, Axis and Histo1D internal state
access/setting, mainly for new persistency. NEEDS PRE-RELEASE TESTING!!!
2015-07-30 Andy Buckley <andy.buckley@cern.ch>
* Remove # markers from YODA format BEGIN/END output. The parser
will continue to accept them.
2015-07-29 Andy Buckley <andy.buckley@cern.ch>
* Add SFINAE trait magic to restrict write(RANGE) functions to
accepting iterables. Also generalising to allow either
container-of-objects or container-of-pointers args by providing a
writeBody(AO*) function to complement writeBody(AO&). Based on a
patch from Lukas Heinrich.
* Add configuration of output streams to throw exceptions on
bad/fail state (based on patch from Lukas Heinrich).
2015-07-01 Andy Buckley <andy.buckley@cern.ch>
* 1.4.0 release.
2015-06-30 Andy Buckley <andy.buckley@cern.ch>
* More tweaks to yodamerge: adding control of S2D merging
strategy, and now performing weighted normalized histo merges
without reference to an absolute normalization.
* Change yodamerge norm-detection heuristic to just look for a
ScaledBy attribute rather than fuzzily compare norms.
2015-06-26 Andy Buckley <andy.buckley@cern.ch>
* Removing add, subtract, and divide functions and operators on
Scatter types, and re-implementing Histo and Profile divide
functions explicitly rather than via mkScatter. Also removed from
the Python interface. The combine() methods remain.
2015-06-24 Andy Buckley <andy.buckley@cern.ch>
* Adding workaround versions of binAt to all the Python histo
types (for some reason the direct mapping that works for bin(i)
produces a compile error for binAt(x) :-/
2015-06-23 Andy Buckley <andy.buckley@cern.ch>
* Renaming, tidying, completing, etc. the Python-mapped methods on Bin1D and Bin2D.
* Rename Python Histo2D mean, variance, etc. pair-returning
methods to xyMean, xyVariance, etc., to distinguish from Profile2D
mean, variance, etc.
* Add Python mappings of all the methods below.
* Add full set of {x,y}{Mean,Variance,StdDev,StdErr,RMS} to 1D and
2D binned distributions.
* Add optional includeoverflows=True argument to all binned AO
numEntries and effNumEntries.
* Fix type of numEntries to always be unsigned long.
2015-06-18 Andy Buckley <andy.buckley@cern.ch>
* Fix typos in Point3D Python mapping (accidentally trying to get
the ptr via _Point2D rather than _Point3D).
2015-06-13 Andy Buckley <andy.buckley@cern.ch>
* Adding an AnalysisObject::name() method, to return the last part
of the path. Mapped into a Python property.
* Adding an optional usestddev argument to mkScatter for profile
types, so the error bars can represent distribution width rather
than uncertainty on the mean. Mapped to Python.
2015-06-08 Andy Buckley <andy.buckley@cern.ch>
* Adding unpatterns arguments to Python read functions, and
auto-conversion from single strings and re.compile()d strs.
2015-06-04 Andy Buckley <andy.buckley@cern.ch>
* Add binAt(x,y) and binIndexAt(iglobal) Python methods for 2D
histos. Still want a way to get and pass a pair of bin indices, I
think.
* Adding includeoverflows optional args for Histo1D (eff)numEntries.
* Adding Rename Histo1D integral() methods as integral(),
integralRange(), and integralTo(), and mapping to Python.
2015-06-02 Andy Buckley <andy.buckley@cern.ch>
* Adding missing binAt and binIndexAt methods to Histo1D and
Profile1D, plus other minor Python mapping tweaks.
* Add a regex pattern match optional argument to the IO.read()
Python functions, for pre-emptive filtering.
2015-03-27 Andy Buckley <andy.buckley@cern.ch>
* Fix a harmless possibility to raise an FPE exception in the
BinSearcher. Thanks to Leif Lonnblad for the discovery, debug and
patch!
2015-03-19 Andy Buckley <andy.buckley@cern.ch>
* Bump version for 1.3.1 release.
2015-03-06 Andy Buckley <andy.buckley@cern.ch>
* Adding usefocus optional argument to some mkScatter functions, plus the Python bindings.
* Cleaning up some Python mappings of 2D histogram bin classes.
* Removing mappings of bin-level fill and scale operations in Python.
* Fix formatting and error handling in Python Bin and Dbn __repr__ methods.
* Add a -i/--in-place option pair on yodascale.
2015-02-05 Andy Buckley <andy.buckley@cern.ch>
* Convert script matching options to use re search rather than match.
* Adding matching options and verbose option to yodals.
2015-01-27 Andy Buckley <andy.buckley@cern.ch>
* Improvements and additions to ROOTCnv.h routines, particularly
to TProfile creation: thanks to Roman Lysak for advice.
2015-01-16 Andy Buckley <andy.buckley@cern.ch>
* Add convenience YODA/YODA.h header.
2015-01-15 Andy Buckley <andy.buckley@cern.ch>
* yodascale now uses PointMatcher and can normalize or multiply to
abs values or ref histos/bin ranges.
2015-01-05 Andy Buckley <andy.buckley@cern.ch>
* Adding yoda.matcher Python sub-package with PointMatcher
functionality. To be used in Professor 2.0 and in yodascale.
* Adding 'scat2' type to yodahist.
* Add match/unmatch args to all conversion scripts, via a new Python yoda.script_helpers function.
* Script updates, improved docstrings, and improved tab completion.
2014-12-10 Andy Buckley <andy.buckley@cern.ch>
* Add a yoda.plotting sub-module, based on matplotlib.
2014-12-03 Andy Buckley <andy.buckley@cern.ch>
* Small build improvements: cleaning test1.root from the yoda2root
test, and adding a make target & flag file for mktemplates in
pyext/yoda to make sure that it only gets run once.
2014-11-25 Andy Buckley <andy.buckley@cern.ch>
* Handle overflow filling in binned types without invoking an exception.
* Change inRange to have non-fuzzy comparison behaviour.
2014-11-11 Andy Buckley <andy.buckley@cern.ch>
* Improving/adding __div__ functions in Python for all binned types.
* Add std:: prefix to isinf() calls in BinSearcher.h.
2014-09-30 Andy Buckley <andy.buckley@cern.ch>
* 1.3.0 release!
* Use numEntries() rather than effNumEntries() when checking
consistency of inputs to efficiency() calculations -- the
effNumEntries of a set can be smaller than that of a strict
subset, surprisingly!
2014-09-17 Andy Buckley <andy.buckley@cern.ch>
* Small improvements to yodahist and yodaplot behaviours/UIs.
* Adding setX/Y/Z(val, err) methods to Point3D.
* Add an efficiency method for 2D histos.
* Hide fill and fillBin methods from Python mappings of bin types.
2014-09-01 Andy Buckley <andy.buckley@cern.ch>
* YODA 1.2.1 release!
2014-08-29 Andy Buckley <andy.buckley@cern.ch>
* Hide non-const access to bin objects from histogram users:
avoids potential for inconsistency between total dbns and in-range
bins.
* Bug in BinSearcher fixed by Peter Richardson: constructor
arguments were passed in the wrong order when constructing a
LinEstimator in cases where log binning wouldn't be allowed.
2014-08-26 Andy Buckley <andy.buckley@cern.ch>
* Add protection against / characters in histo names in yoda2root
(thanks to Will Bell for the report and suggested patch).
2014-08-17 Andy Buckley <andy.buckley@cern.ch>
* Add +=, -=, *-, /=, ++ and -- operators to Counter, along with
an (implicit) constructor from a double -- all for user
convenience so Counter can be used in lieu of a simple number.
2014-08-15 Andy Buckley <andy.buckley@cern.ch>
* YODA 1.2.0 release!
* Permit +-inf values to be filled into histograms; NaN fills will
still explicitly throw an exception.
* Add unit tests for Counter, Scatter1D, and Scatter2D, including
persistency.
* Adding YODA and FLAT format I/O for Scatter1D and Counter (as
far as currently possible -- FLAT Counter can't be read due to a
#item ambiguity, just like the one between the YODA format Point3D
and ProfileBin1D). To be continued...
2014-08-14 Andy Buckley <andy.buckley@cern.ch>
* Python mappings for Dbn0D and Counter, and other improvements.
* Adding val() and err() methods to Counter, and errW() and
relErrW() to all DbnXD types.
* Adding Scatter1D and Point1D types, with conversion from Counter
supported. Both Counter and Scatter1D still need to be supported
by YODA persistency.
2014-08-11 Andy Buckley <andy.buckley@cern.ch>
* Add ROOT version checking to configure. Thanks to Michael Grosse
for the report/request.
2014-08-05 Andy Buckley <andy.buckley@cern.ch>
* Remove all methods not specific about the axis to which they
refer, e.g. Histo1D::mean -> xMean. Also remove all related
aliases (a nightmare to maintain) and low/highEdge and midpoint
functions: use the proper xMin/Max/Mid from now on. This is a
significant compatibility breaking API change (and the decision
was not taken lightly) so will require a 2nd digit version change.
* Lots of adding xMin/Max etc. functions to C++ and Python bin/histo classes.
* Compiler pickiness fixes in BinSearcher.
* Improvement to linspace, avoiding fuzzyEquals and again making
sure that the end value is exact.
2014-07-23 Andy Buckley <andy.buckley@cern.ch>
* Fix to logspace: make sure that start and end values are exact,
not the result of exp(log(x)).
* Clean-up, minor improvements, and adding a test for BinSearcher and friends.
2014-07-19 Andy Buckley <andy.buckley@cern.ch>
* Various consistency improvements and minor bugfixes to Python
mapping utils and Dbn and Bin objects.
* Fix Axis2D::reset, which was resetting the total dbn and
outflows, but not the bins!!! Thanks to Ewen Gillies for the
report.
2014-07-18 Andy Buckley <andy.buckley@cern.ch>
* Add scaleX,Y,Z and scaleXYZ to Point and Scatter classes, and
deprecate less explicit/consistent Scatter2D/3D.scale method.
2014-07-17 Andy Buckley <andy.buckley@cern.ch>
* yodascale now writes out rescaled histograms and profiles rather than scatters.
* A few more improvements on Point2D/3D, adding x,y,zMin/Max function mappings.
* Add first version of a yodascale script, based on code from Simone Amoroso.
2014-07-16 Andy Buckley <andy.buckley@cern.ch>
* More Scatter and 2D histo interface improvement.
* Remove 'return *this' from Scatter2D/3D add and combine methods.
* Add unit test checks for 1D and 2D mkScatter functions.
* Improve Scatter2D/3D C++ and Python interfaces.
* Add Scatter3D Python mapping.
2014-07-15 Andy Buckley <andy.buckley@cern.ch>
* Add auto-parsing of yes/no/on/off/true/false as bools in the
Python ao.annotation() function.
* Add parsing of yodaplot styles from command line args and
analysis object annotations.
2014-07-12 Andy Buckley <andy.buckley@cern.ch>
* Fix infinite recursions in Python wrappers for Point2D and
Point3D, and make the Python Point3D interface more standard.
* Add yodaplot script for basic plotting, using pgfplots as a backend.
2014-07-10 Andy Buckley <andy.buckley@cern.ch>
* Add mkScatter(Scatter2D) and mkScatter(Scatter3D) functions and
Python mappings: this allows all AOs to be used as args to
mkScatter(...) without needing to check if they already are
scatters.
2014-07-02 Andy Buckley <andy.buckley@cern.ch>
* Set y value and/or error to 0 in mkScatter(Histo1D) if an
exception is thrown when calculating the appropriate values. Need
an optional param to control this error handling behaviour between
set-zero and skip-bin?
2014-07-01 Andy Buckley <andy.buckley@cern.ch>
* Add exception translation to the mkScatter functions.
* Add -m/-M match/unmatch options to yodacnv -- useful for
filtering histogram file contents in a YODA->YODA conversion.
2014-06-24 Andy Buckley <andy.buckley@cern.ch>
* Don't complain about merge assumptions if there is only one
object with that path name to be 'merged'
2014-06-17 Andy Buckley <andy.buckley@cern.ch>
* Adding explicit int cast in Python wrapping of numEntries functions.
2014-06-13 Andy Buckley <andy.buckley@cern.ch>
* Adding yodals script to list data file contents.
2014-06-11 David Grellscheid <David.Grellscheid@durham.ac.uk>
* pyext/yoda/Makefile.am: 'make distcheck' and out-of-source
builds should work now.
2014-06-10 Andy Buckley <andy.buckley@cern.ch>
* Fix use of the install command for bash completion installation on Macs.
2014-06-06 Andy Buckley <andy.buckley@cern.ch>
* YODA 1.1.0 release. Middle version number change to reflect API changes w.r.t 1.0.6.
* Adding unit tests against ref data for yodamerge in make check.
2014-06-04 Andy Buckley <andy.buckley@cern.ch>
* Fix silly typos in yodamerge which somehow made it past "make check" testing :-(
2014-06-02 Andy Buckley <andy.buckley@cern.ch>
* YODA 1.0.7 release. DO NOT USE: prefer 1.1.0, above.
2014-05-30 Andy Buckley <andy.buckley@cern.ch>
* Removing 'foreach' macro definition and using raw BOOST_FOREACH instead until C++11 is allowed.
* Adding pytest-p1d and pytest-p2d tests, and FLAT writing/reading in pytests.
* Tweaking WriterFLAT and adding ReaderFLAT functionality for 2D histos and profiles.
2014-05-30 Holger Schulz <hschulz@physik.hu-berlin.de>
* Some basic (FLAT) write-out capability for 2D histos
2014-05-29 Andy Buckley <andy.buckley@cern.ch>
* Improvements to the yodahist script, including support for 2D
histograms and input files.
* Adding bin edges constructors for all 1D and 2D histos in Python.
2014-05-22 Andy Buckley <andy.buckley@cern.ch>
* Improvements to Profile2D and Point2D interfaces in Python.
* Add a single-file at a time yodacnv multi-format converter
script (thanks to Andrii Verbytskyi for the suggestion).
2014-05-19 Andy Buckley <andy.buckley@cern.ch>
* Typo fixes in Profile2D YODA-format parsing: 2D histo tests now pass!
* Adding Python tests for Histo2D and Profile2D.
* Adding a YODA/Predicates.h header and using it in Axis2D bin edge construction.
* Enabling Profile2D writing in various Writers, and a bit of IO code tidying.
2014-05-17 Andy Buckley <andy.buckley@cern.ch>
* Disable writing out of Histo2D and Profile2D outflows for now,
while they are redesigned, and get 2D I/O working for the in-range
part.
2014-05-14 Andy Buckley <andy.buckley@cern.ch>
* Mapping the divide and efficiency functions into the Python
interface as class methods, including the __div__ special
function.
2014-05-13 Andy Buckley <andy.buckley@cern.ch>
* Add the AnalysisObject::type() method back in Python (even
though type(ao) is more Pythonic, this may be useful)
2014-05-06 Andy Buckley <andy.buckley@cern.ch>
* Add Profile2D YODA format writing, note need for Scatter format
change, add sumXY storage to both 2D histo types.
2014-05-03 Andy Buckley <andy.buckley@cern.ch>
* Adding YODA reader functionality for Histo2D and Profile2D, but
without outflows support yet.
2014-04-25 Andy Buckley <andy.buckley@cern.ch>
* Adding simple command line yodahist script for quick 1D
histogramming from plain text files, with weight support. More
development to come!
* Mapping linspace, logspace and a few stat functions into Python.
2014-04-24 Andy Buckley <andy.buckley@cern.ch>
* Fixes, script installation, and detailed numerical comparisons
in yodadiff.
2014-04-17 Andy Buckley <andy.buckley@cern.ch>
* Change AnalysisObject::annotations to return the list of
annotation keys rather than the map, since the previous behaviour
mapped very badly into Python.
2014-04-16 Andy Buckley <andy.buckley@cern.ch>
* Add special case handling for 2-arg use of x2y scripts where the
second arg is -, for stdin. This will be treated as writing out to
stdout, not converting two files one of which is stdin.
2014-04-15 Andy Buckley <andy.buckley@cern.ch>
* Adding a more portable version of getline to be used in the YODA
file parsing to avoid falling over on DOS-produced input files.
2014-04-14 Andy Buckley <andy.buckley@cern.ch>
* Adding the namespace protection workaround for Boost described
at http://www.boost.org/doc/libs/1_55_0/doc/html/foreach.html
2014-04-13 Andy Buckley <andy.buckley@cern.ch>
* Adding an assumed-equal-run-size, ratio-like merging heuristic
for Scatter2Ds to yodamerge, and renaming the --normalize-all flag
to --assume-normalized.
* Adding and installing a pkg-config data file for YODA.
* Rationalising (and fixing?) the yodamerge logic re. user &
normalization scalings, and making way for a Scatter2D merging
heuristic.
2014-03-10 Andy Buckley <andy.buckley@cern.ch>
* YODA 1.0.6 release.