Release 'devel' version with NEWS file ready for stable branch.

Author: charles-plessy

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: CAGEr
 Title: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
-Version: 2.7.1
-Date: 2023-07-05
+Version: 2.7.2
+Date: 2023-10-07
 Authors@R:
   c( person("Vanja",   "Haberle",   email = "vanja.haberle@gmail.com",       role = "aut"),
      person("Charles", "Plessy",    email = "charles.plessy@oist.jp",        role = "cre"),

NEWS.md

@@ -1,18 +1,4 @@
-# Changes in devel version
-
-BUG FIXES
-
--   Fix accidental deletion of the record of the  _tag clustering_ method (#96).
-
-NEW FEATURES
-
--   New `resetCAGEexp()` function.
--   New `flagByUpstreamSequences()` function.
--   The `annotateCTSS` and `annotateConsensusClusters` function gain a
-    `upstream` and a `downstream` parameter to change the width of promoter
-    regions.
-
-# Changes in version 2.7.1
+# Changes in version 2.8.0
 
 BUG FIXES
 
@@ -28,13 +14,19 @@ BUG FIXES
     `sample = NULL`.  The bug was causing incorrectly short quantile ranges.
 -   Force the cluster names to stay sorted, to avoid a bug desynchronising
     quantile information and genome coordinates.
+-   Fix accidental deletion of the record of the  _tag clustering_ method (#96).
 
 NEW FEATURES
 
 -   Allow URLs to files in `getCTSS()` (Fixes #50).
 -   Accelerated the computation of quantile position by ~20 times.
+-   New `resetCAGEexp()` function.
+-   New `flagByUpstreamSequences()` function.
+-   The `annotateCTSS` and `annotateConsensusClusters` function gain a
+    `upstream` and a `downstream` parameter to change the width of promoter
+    regions.
 
-# Changes in version 2.6.0
+# Changes in version 2.6.0 (26/4/2023)
 
 BUG FIXES