DESCRIPTION

Package: MolEvolvR
Title: Molecular Evolution and Phylogeny
Version: 0.99.9
Authors@R:
    c(person("Janani", "Ravi", email = "janani.ravi@cuanschutz.edu", role = c("aut", "cre"),
        comment=c(ORCID="0000-0001-7443-925X")),
    person("David", "Mayer", role = "aut",
        comment = c(ORCID = "")),
    person("Evan", "Brenner", role = "aut",
        comment = c(ORCID = "")),
    person("Faisal", "Alquaddoomi", role = "aut",
        comment = c(ORCID = "")),
    person("Samuel", "Chen", role = "ctb",
        comment = c(ORCID = "")),
    person("Lo", "Sosinski", role = "ctb",
        comment = c(ORCID = "")),
    person("Joseph", "Burke", role = "ctb",
        comment = c(ORCID = "")),
    person("Jacob", "Krol", role = "ctb",
        comment = c(ORCID = "")))
Description: This R package provides a framework for characterizing proteins using molecular evolution and phylogeny.
License: BSD_3_clause + file LICENSE
URL: https://github.com/jravilab/molevolvr, https://jravilab.github.io/MolEvolvR/
BugReports: https://github.com/jravilab/molevolvr/issues
biocViews:
Depends: 
    R (>= 4.4.0)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Imports: 
    ape,
    assertthat,
    base64enc,
    Biostrings,
    biomartr,
    d3r,
    data.table,
    DBI,
    doParallel,
    dplyr,
    forcats,
    fs,
    furrr,
    future,
    gggenes,
    ggplot2,
    glue,
    gridExtra,
    here,
    htmltools,
    htmlwidgets,
    igraph,
    latexpdf,
    magrittr,
    msa,
    pdftools,
    phangorn,
    plotly,
    purrr,
    RColorBrewer,
    readr,
    rentrez,
    rlang,
    RMariaDB,
    sendmailR,
    seqinr,
    shiny,
    stringi,
    stringr,
    sunburstR,
    tibble,
    tidyr,
    tinytex,
    tools,
    UpSetR,
    viridis,
    visNetwork,
    wordcloud,
    wordcloud2,
    XVector,
    yaml
Suggests:
    knitr