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Create version 25.0.2
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client/package.json

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{
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"name": "@galaxyproject/galaxy-client",
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"version": "25.0.2.dev0",
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"version": "25.0.2",
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"description": "Galaxy client application build system",
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"keywords": [
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"galaxy"

lib/galaxy/version.py

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VERSION_MAJOR = "25.0"
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VERSION_MINOR = "2.dev0"
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VERSION_MINOR = "2"
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VERSION = VERSION_MAJOR + (f".{VERSION_MINOR}" if VERSION_MINOR else "")

package.json

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{
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"name": "@galaxyproject/galaxy",
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"version": "25.0.1",
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"version": "25.0.2",
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"description": ".. figure:: https://galaxyproject.org/images/galaxy-logos/galaxy_project_logo.jpg :alt: Galaxy Logo",
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"main": "index.js",
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"scripts": {

packages/app/HISTORY.rst

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25.0.2.dev0
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-------------------
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25.0.2 (2025-08-13)
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-------------------
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910

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=========
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Bug fixes
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=========
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* Fix restricting user defined tool input datasets extensions by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20545 <https://github.com/galaxyproject/galaxy/pull/20545>`_
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* Don't assume cwd = job directory when running prepare dirs by `@natefoo <https://github.com/natefoo>`_ in `#20571 <https://github.com/galaxyproject/galaxy/pull/20571>`_
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* Fix apply rules ownership check by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20582 <https://github.com/galaxyproject/galaxy/pull/20582>`_
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* Prevent importing workflows with invalid step UUID by `@davelopez <https://github.com/davelopez>`_ in `#20596 <https://github.com/galaxyproject/galaxy/pull/20596>`_
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* Constraint conditional `redis` version to allow only minor updates by `@davelopez <https://github.com/davelopez>`_ in `#20603 <https://github.com/galaxyproject/galaxy/pull/20603>`_
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* Fix optional unspecified input to conditional step by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20647 <https://github.com/galaxyproject/galaxy/pull/20647>`_
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* Avoid postgres truncation of aliases and labels by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20649 <https://github.com/galaxyproject/galaxy/pull/20649>`_
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* Fix deferred datasets in multiple dataset parameters. by `@jmchilton <https://github.com/jmchilton>`_ in `#20650 <https://github.com/galaxyproject/galaxy/pull/20650>`_
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* Bump up pulsar dependency to 0.15.9 by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20672 <https://github.com/galaxyproject/galaxy/pull/20672>`_
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* Fix dataset serializers and response models by `@arash77 <https://github.com/arash77>`_ in `#20694 <https://github.com/galaxyproject/galaxy/pull/20694>`_
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* Update galaxy-release-util by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20727 <https://github.com/galaxyproject/galaxy/pull/20727>`_
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* Fix maximum workflow invocation duration test by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20729 <https://github.com/galaxyproject/galaxy/pull/20729>`_
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============
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Enhancements
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============
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* Add redis conditional dependency by `@davelopez <https://github.com/davelopez>`_ in `#20502 <https://github.com/galaxyproject/galaxy/pull/20502>`_
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* Improve workflow monitor loop times by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20522 <https://github.com/galaxyproject/galaxy/pull/20522>`_
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packages/app/setup.cfg

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long_description_content_type = text/x-rst
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name = galaxy-app
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url = https://github.com/galaxyproject/galaxy
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version = 25.0.2.dev0
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version = 25.0.2
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[options]
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include_package_data = True

packages/auth/HISTORY.rst

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No recorded changes since last release
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packages/auth/setup.cfg

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long_description_content_type = text/x-rst
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name = galaxy-auth
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url = https://github.com/galaxyproject/galaxy
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version = 25.0.2.dev0
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version = 25.0.2
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include_package_data = True

packages/config/HISTORY.rst

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-------------------
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============
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Enhancements
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============
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* add fasta.bz2 as auto_compressed type by `@bernt-matthias <https://github.com/bernt-matthias>`_ in `#20496 <https://github.com/galaxyproject/galaxy/pull/20496>`_
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* Add datatype for LexicMap index by `@Smeds <https://github.com/Smeds>`_ in `#20586 <https://github.com/galaxyproject/galaxy/pull/20586>`_
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* Add mzMLb and MBI datatypes by `@chambm <https://github.com/chambm>`_ in `#20632 <https://github.com/galaxyproject/galaxy/pull/20632>`_
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* Pairtool updated format and sniffers by `@Smeds <https://github.com/Smeds>`_ in `#20634 <https://github.com/galaxyproject/galaxy/pull/20634>`_
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* Add support for M4A audio files by `@arash77 <https://github.com/arash77>`_ in `#20667 <https://github.com/galaxyproject/galaxy/pull/20667>`_
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packages/config/setup.cfg

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long_description_content_type = text/x-rst
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name = galaxy-config
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url = https://github.com/galaxyproject/galaxy
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version = 25.0.2.dev0
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version = 25.0.2
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include_package_data = True

packages/data/HISTORY.rst

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25.0.2 (2025-08-13)
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-------------------
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910

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=========
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Bug fixes
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=========
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* Remove ``num_unique_values`` tiff metadata element by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20464 <https://github.com/galaxyproject/galaxy/pull/20464>`_
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* Propagate cached job output replacement to copies of outputs by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20553 <https://github.com/galaxyproject/galaxy/pull/20553>`_
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* Fix deferred datasets in multiple dataset parameters. by `@jmchilton <https://github.com/jmchilton>`_ in `#20650 <https://github.com/galaxyproject/galaxy/pull/20650>`_
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* Add `num_unique_values` tiff metadata element, fixed by `@kostrykin <https://github.com/kostrykin>`_ in `#20669 <https://github.com/galaxyproject/galaxy/pull/20669>`_
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============
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Enhancements
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============
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* Improve workflow monitor loop times by `@mvdbeek <https://github.com/mvdbeek>`_ in `#20522 <https://github.com/galaxyproject/galaxy/pull/20522>`_
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* Pairtool updated format and sniffers by `@Smeds <https://github.com/Smeds>`_ in `#20634 <https://github.com/galaxyproject/galaxy/pull/20634>`_
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* Add support for M4A audio files by `@arash77 <https://github.com/arash77>`_ in `#20667 <https://github.com/galaxyproject/galaxy/pull/20667>`_
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