Update Python controller bindings with latest Commissioning API updates

This adds commissioning API updates from the master branch to our 1.3
based branch. This makes the commissioning API more Pythonic and allows
to call them from the asyncio event loop directly.

Specifically, this integrates changes from the following PRs
- project-chip/connectedhomeip#33954
- project-chip/connectedhomeip#33905
- project-chip/connectedhomeip#34001
- project-chip/connectedhomeip#33989

Author: agners