Improve CI build [ci skip]

Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>

Author: pditommaso

.github/workflows/build.yml

@@ -28,9 +28,6 @@ jobs:
         java_version: [17, 23]
 
     steps:
-      - name: Environment
-        run: env | sort
-
       - name: Checkout
         uses: actions/checkout@v4
         with:
@@ -160,6 +157,7 @@ jobs:
 
       - name: Run tests
         run: |
+          env | sort
           cat $HOME/.nextflow/scm
           make clean assemble install
           bash test-ci.sh
@@ -191,7 +189,8 @@ jobs:
         with:
           name: report-${{ matrix.test_mode }}-jdk-${{ matrix.java_version }}
           path: |
-            validation/**
+            validation/**/*
+            validation/**/.*
             integration-tests.tar
 
   test-e2e:

test-ci.sh

@@ -15,7 +15,6 @@ export NXF_CMD=$PWD/nextflow;
 export TEST_JDK
 export TEST_MODE
 
-unset JAVA_TOOL_OPTIONS # this variable mess-up Capsule loader Java version parsing
 (
  $NXF_CMD info
  cd validation