DESCRIPTION

Package: LOLA
Version: 1.19.1
Date: 2020-09-01
Title: Locus overlap analysis for enrichment of genomic ranges
Description: Provides functions for testing overlap of sets of genomic regions
    with public and custom region set (genomic ranges) databases. This makes it
    possible to do automated enrichment analysis for genomic region sets, thus
    facilitating interpretation of functional genomics and epigenomics data.
Authors@R: c(person("Nathan", "Sheffield", email = "nathan@code.databio.org", role=c("aut", "cre")),
            person("Christoph", "Bock", role=c("ctb")))
Author: Nathan Sheffield <http://www.databio.org> [aut, cre],
    Christoph Bock [ctb]
Maintainer: Nathan Sheffield <nathan@code.databio.org>
Depends: R (>= 2.10)
Imports:
    BiocGenerics,
    S4Vectors,
    IRanges,
    GenomicRanges,
    data.table,
    reshape2,
    utils,
    stats,
    methods
Suggests:
    parallel,
    testthat,
    knitr,
    BiocStyle,
    rmarkdown
Enhances: simpleCache, qvalue, ggplot2
VignetteBuilder: knitr
License: GPL-3
biocViews: GeneSetEnrichment, GeneRegulation, GenomeAnnotation, SystemsBiology,
    FunctionalGenomics, ChIPSeq, MethylSeq, Sequencing
URL: http://code.databio.org/LOLA
BugReports: http://github.com/nsheff/LOLA
RoxygenNote: 7.1.0