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upload notebooks for generation of figures (cell system submission)
1 parent df8b0f2 commit 15f9266

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‎manuscript/Figure2/Figure2.ipynb

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‎manuscript/Figure2/Figure2.pdf

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‎manuscript/Figure2/random_partition_average_testhat_929.csv

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‎manuscript/Figure2/seed_871/.DS_Store

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‎manuscript/Figure2/seed_871/6_best.W.loss.0.03349903155118227.csv

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‎manuscript/Figure2/seed_871/6_best.alpha.loss.0.03349903155118227.csv

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BIM,1.9447
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Caveolin,1.5822434
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CyclinB1,1.4775206
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CyclinD1,1.8420327
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GSK3abpS21,1.432176
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GSKpS9,0.9069437
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IGFBP2,1.6493031
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p38pT180,2.340389
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p53,1.7530639
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p70S6KpT389,0.7392924
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SRCpY527,0.9990577
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STAT3pY705,1.7843411
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TSC2pT1462,2.0964353
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YAPpS127,1.178731
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AKTpT308,0.97663724
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AKT,1.8499388
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b-CateninpS,2.0935442
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HSP27,1.8690017
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IGF1R-beta,1.6336954
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IRS1,1.3868499
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p27,1.7435615
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c-Myc,1.924026
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STAT5pY694,1.0858345
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COX2,2.3349116
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a-tubulin,1.4256104
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BCL2,1.0609411
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bRAF,1.8571873
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c-JUNpS73,1.7415105
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Casp9cAsp31,1.1194322
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CHK1pS345,2.1048822
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cRAFV,1.2105726
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EGFRV,1.1576775
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ELK1pS383,0.9921068
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GATA3,0.96437746
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GSK3ab,2.4790637
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mTORpS2448,1.7357824
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PCNA,1.6680808
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PKCa,1.8856763
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4EBP1pT70,1.2663357
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ACCpS79,1.7893596
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IRS1pS307,1.4951714
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p38,1.2794389
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cellviab,0.95978564
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aMEK,1.0505557
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aAKT,1.0100747
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aHDAC,1.9226482
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aMDM2,1.0680306
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aJAK,0.9714392
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aBRAFm,1.1602432
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aPKC,1.9023606
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aSTAT3,2.0717995
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amTOR,1.0770721
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aPI3K,1.2054353
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aCDK4,1.407575
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aSRC,0.83707607

‎manuscript/Figure2/seed_871/6_best.eps.loss.0.03349903155118227.csv

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4EBP1pS65,1.7278428
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MAPKpT202,1.7558315
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MEKpS217,1.7453363
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S6,0.9659667
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PAI-1,1.3952813
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AKTpS473,3.9829671
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AMPKpT172,0.9172592
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b-Catenin,1.5475028
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BIM,1.0634202
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Caveolin,1.5414795
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CyclinB1,1.8898276
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CyclinD1,0.90811723
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GSK3abpS21,1.3322612
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GSKpS9,1.6831009
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IGFBP2,1.0131292
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p38pT180,1.4310831
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p53,0.99256706
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STAT3pY705,1.0526443
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YAPpS127,1.7512753
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ACC1,0.7292948
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AKTpT308,1.6194487
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AKT,1.0217471
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Fibronectin,0.6388385
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HSP27,0.9831484
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IGF1R-beta,1.0040977
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IRS1,1.3083299
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p27,0.8766556
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c-Myc,0.8210167
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STAT3,1.1229757
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STAT5,1.1585097
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STAT5pY694,1.3565614
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COX2,1.5161248
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PAX2,0.8301391
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PLK1,0.8598456
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YBIpS102,1.6852694
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a-tubulin,1.46576
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ATMpS1981,0.8139112
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ATR,1.3037703
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BCL2,0.61545414
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bRAF,0.96715224
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c-JUNpS73,0.914814
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Casp9cAsp31,1.5995244
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CHK1pS345,0.5468789
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cRAFV,1.4243902
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EGFRV,1.4466981
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ELK1pS383,1.5614507
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ERa,0.7636838
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GATA3,0.94950855
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GSK3ab,1.4916048
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mTORpS2448,0.9430395
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p21,1.5408993
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TAZpS89,0.99384594
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PCNA,1.0538836
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PDK1pS241,0.86276025
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PI3Kp85,1.5482349
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PKCa,0.84163034
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RAD51,0.9704704
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SRCpY416,1.0067635
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4EBP1pT70,1.6365488
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CyclinE1,1.4804119
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IRS1pS307,1.559334
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p38,1.4075851
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SMAD3pS423,0.9050298
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TSC2,0.99600387
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SRC,1.5076602
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G1arrest,2.1865318
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G2arrest,0.7816996
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cellviab,3.0502343
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aMEK,1.4173297
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aHDAC,1.7278454
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aJAK,1.0385336
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aBRAFm,1.0094314
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aPKC,3.1073089
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aSTAT3,1.7656472
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amTOR,1.4972287
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aPI3K,1.4065152
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aCDK4,1.0998522
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aSRC,1.1146412

‎manuscript/Figure2/seed_871/random_pos.csv

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