diff --git a/Boltz1.ipynb b/Boltz1.ipynb index a2df3385..e3282518 100644 --- a/Boltz1.ipynb +++ b/Boltz1.ipynb @@ -210,7 +210,11 @@ " os.system(\"touch COLABFOLD_READY\")\n", "\n", "if not os.path.isfile(\"BOLZ_READY\"):\n", + " os.system(\"apt-get install -y aria2\")\n", " os.system(\"pip install -q --no-warn-conflicts boltz\")\n", + " os.system(\"mkdir weights\")\n", + " os.system(\"aria2c -d weights -x8 -s8 https://colabfold.steineggerlab.workers.dev/boltz1.ckpt\")\n", + " os.system(\"aria2c -d weights -x8 -s8 https://colabfold.steineggerlab.workers.dev/ccd.pkl\")\n", " os.system(\"touch BOLZ_READY\")" ] }, @@ -231,7 +235,7 @@ "cell_type": "code", "source": [ "#@title Predict structure using boltz\n", - "!boltz predict --out_dir \"{jobname}\" \"{jobname}/{jobname}.fasta\"" + "!boltz predict --out_dir \"{jobname}\" \"{jobname}/{jobname}.fasta\" --cache weights" ], "metadata": { "cellView": "form",