pixi.toml

[project]
name = "watersnake"
version = "0.1.0"
description = "Minimal Python bindings to WFA2-lib"
authors = ["Travis Wrightsman <tw493@cornell.edu>"]
channels = ["conda-forge", "bioconda"]
platforms = ["linux-64"]

[tasks]
format = { cmd = [ "black", "src/" ] }
build-sdist = { cmd = [ "python", "-m", "build", "--sdist", "--no-isolation" ] }
build-wheel = { cmd = [ "WATERSNAKE_LIBWFA2_INCLUDE_DIR=\"$CONDA_PREFIX/include/wfa2lib\"", "python", "-m", "build", "--wheel", "--no-isolation" ] }
auditwheel-repair = { cmd = [ "auditwheel", "repair", "--wheel-dir", "dist/", "dist/*-linux*.whl" ], depends_on = [ "build-wheel" ] }
auditwheel-show = { cmd = [ "auditwheel", "show", "dist/*-manylinux_*.whl" ], depends_on = [ "auditwheel-repair" ] }
twine-check = { cmd = [ "twine", "check", "dist/*" ], depends_on = [ "build-sdist", "auditwheel-show" ] }
clean = { cmd = [ "rm", "-rf", "build/", "dist/" ] }

[dependencies]
wfa2-lib = "==2.3.3=h4ac6f70_2"
python = ">=3.8,<4"
pip = ""
python-build = "=1"
twine = "=4"
auditwheel = "=5"
cython = "=3"
compilers = ""
patchelf = "~=0.17.2"
black = "=23"