Celer Sight AI is a free high-throughput imaging analysis solution that leverages AI to simplify microscopy image analysis through a community powered AI model segmentation catalogue that is constantly improving. Perfect for researchers and professionals who need powerful image analysis without coding expertise.
- 🚀 High-Throughput Analysis: Process fluorescent images much faster than traditional methods
- ⚡️ Adaptive AI Models: Community-driven model hub that continuously improves through collective usage
- 🛠️ Experiment Reproducibility: Save and load sessions with
.bmicsfiles - 🖥️ Cross-Platform: Fully supported on macOS and Windows
- 🤓 User-Friendly Interface: Pre-trained AI models and automated analysis - no coding required
- 💾 Optimized Performance: Efficient handling of large TIF files with smart disk caching
- 🔬 WSI Compatible: Support for pyramidal whole slide images
- 🌐 Open Source Models: All models available through HuggingFace for community use
- 🗂️ Intuitive Data Import: Simple drag-and-drop interface for batch processing
Traditional image analysis tools often require extensive training or programming knowledge. Celer Sight revolutionizes this workflow by providing:
- Intuitive interface for immediate productivity
- Community-driven model development
- Automated analysis pipelines
Please follow the quick start guide here
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Clone the repository:
git clone https://github.com/BioMarkerImaging/SelerSightAIcd celer-sight-ai -
Create and activate a virtual environment:
Windows:
python -m venv .venv.venv\Scripts\activatemacOS/Linux:
python -m venv .venvsource .venv/bin/activate -
Install dependencies:
pip install -r requirements.txt pip install -v -e .
Initially, all users will have access to cloud compute, however, within the next year this will change. For free users Celer Sight will download a version of the requested model automatically and run inference on users machine in the background. If you still need cloud inference, there will be a paid option available for those who can support it.
- Cloud inference available to all users
- Zero data retention policy
- No image or metadata storage
- Daily limit to all users, with an increased limit to patreon members
- Local inference by default
- Potential cloud inference during low-traffic periods
- Access to all community models
- Community model contributions
- Priority cloud inference
- Private model development possible
- Dedicated processing resources
- Premium support access
We welcome contributions from the community! Here are some ways you can help:
- Submit bug reports and feature requests through GitHub Issues
- Contribute code improvements via Pull Requests
- Share annotated datasets to help improve our models through the app or by email
- Help document and improve our wiki
If you find Celer Sight useful, consider supporting its development:
Your support helps us maintain and improve Celer Sight for everyone!
- Account information for registered users (email only)
- When a user contributes images we retain Image (without metadata) and annotation data
- Zero retention policy during inference.
- No data is shared with any other third parties.
Celer Sight AI is available under two licensing options:
- Free for academic and research use under Creative Commons Attribution-NonCommercial 4.0 International License
- Allows sharing and adaptation of the material for non-commercial purposes
- Requires appropriate attribution
- See LICENSE file for full terms
- Required for any commercial or non-academic use
- Includes private model / data options and cloud inference.
- Contact us for pricing and terms:
Note: The software includes third-party components under various open-source licenses (LGPL, BSD) - see the extra_libs directory for individual component licenses.