Bring in constituent tendency updater (#292)

Tag name (required for main):
Originator(s): peverwhee

Summary (include the keyword ['closes', 'fixes', 'resolves'] and issue
number): Brings in and enables new apply_constituent_tendencies scheme
(from ESCOMP/atmospheric_physics#111)

Describe any changes made to build system: Exclude constituent
tendencies from required variables (now handled by the CCPP Framework in
NCAR/ccpp-framework#584)

Describe any changes made to the namelist: None

List any changes to the defaults for the input datasets (e.g. boundary
datasets): None

List all files eliminated and why: None

List all files added and what they do: None

List all existing files that have been modified, and describe the
changes:
(Helpful git command: `git diff --name-status
development...<your_branch_name>`)

M     .gitmodules
- update CCPP-Framework and atmospheric_physics externals to point to
updates for constituent tendencies

M     src/data/write_init_files.py
- exclude constituent tendency variables (and array) from required
variables list

If there are new failures (compare to the existing-test-failures.txt
file),
have them OK'd by the gatekeeper, note them here, and add them to the
file.
If there are baseline differences, include the test and the reason for
the
diff. What is the nature of the change? Roundoff?

derecho/intel/aux_sima:

derecho/gnu/aux_sima:

CAM-SIMA date used for the baseline comparison tests if different than
latest:

---------

Co-authored-by: Courtney Peverley <courtneyp@izumi.cgd.ucar.edu>

.gitmodules

@@ -1,7 +1,7 @@
 [submodule "ccpp-framework"]
         path          = ccpp_framework
         url           = https://github.com/NCAR/ccpp-framework
-        fxtag         = 2024-10-31-dev
+        fxtag         = 2024-11-07-dev
         fxrequired    = AlwaysRequired
 	fxDONOTUSEurl = https://github.com/NCAR/ccpp-framework
 [submodule "history"]
@@ -20,7 +20,7 @@
 [submodule "ncar-physics"]
         path          = src/physics/ncar_ccpp
 	url           = https://github.com/ESCOMP/atmospheric_physics
-	fxtag         = atmos_phys0_06_000
+	fxtag         = 045b630a8c3b41d90b6c006392c3907af762dd39
         fxrequired    = AlwaysRequired
         fxDONOTUSEurl = https://github.com/ESCOMP/atmospheric_physics
 [submodule "ccs_config"]

src/data/write_init_files.py

@@ -23,6 +23,7 @@
                           'number_of_ccpp_constituents',
                           'number_of_ccpp_advected_constituents',
                           'ccpp_constituents',
+                          'ccpp_constituent_tendencies',
                           'ccpp_constituent_properties',
                           'ccpp_constituent_minimum_values',
                           'ccpp_error_message',
@@ -326,7 +327,7 @@ def gather_ccpp_req_vars(cap_database):
         for cvar in cap_database.call_list(phase).variable_list():
             stdname = cvar.get_prop_value('standard_name')
             intent = cvar.get_prop_value('intent')
-            is_const = cvar.get_prop_value('advected')
+            is_const = cvar.get_prop_value('advected') or cvar.get_prop_value('constituent')
             if ((intent in _INPUT_TYPES) and
                 (stdname not in req_vars) and
                 (stdname not in _EXCLUDED_STDNAMES)):

test/unit/sample_files/write_init_files/phys_vars_init_check_4D.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_4D
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_4D
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_bvd.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_bvd
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_bvd
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_cnst.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_cnst
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 3
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -51,6 +51,7 @@ module phys_vars_init_check_cnst
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_ddt.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_ddt
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_ddt
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_ddt2.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_ddt2
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_ddt2
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_ddt_array.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_ddt_array
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_ddt_array
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_host_var.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_host_var
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 1
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -49,6 +49,7 @@ module phys_vars_init_check_host_var
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_mf.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_mf
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_mf
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_no_horiz.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_no_horiz
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_no_horiz
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_noreq.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_noreq
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 0
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 0
@@ -48,6 +48,7 @@ module phys_vars_init_check_noreq
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_param.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_param
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 3
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 26
@@ -51,6 +51,7 @@ module phys_vars_init_check_param
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_protect.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_protect
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_protect
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_scalar.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_scalar
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_scalar
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &

test/unit/sample_files/write_init_files/phys_vars_init_check_simple.F90

@@ -34,7 +34,7 @@ module phys_vars_init_check_simple
    integer, public, parameter :: READ_FROM_FILE = 3
    ! Total number of physics-related variables:
    integer, public, parameter :: phys_var_num = 2
-   integer, public, parameter :: phys_const_num = 15
+   integer, public, parameter :: phys_const_num = 16
 
    !Max length of physics-related variable standard names:
    integer, public, parameter :: std_name_len = 25
@@ -50,6 +50,7 @@ module phys_vars_init_check_simple
    character(len=36), public, protected :: phys_const_stdnames(phys_const_num) = (/ &
       "ccpp_constituent_minimum_values     ", &
       "ccpp_constituent_properties         ", &
+      "ccpp_constituent_tendencies         ", &
       "ccpp_constituents                   ", &
       "ccpp_error_code                     ", &
       "ccpp_error_message                  ", &