Added relaxed semantic validation file for xcms #18
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| name: Spec Build Workflow | |
| # This workflow triggers on direct pushes to master or PRs | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| env: | |
| DOC_IN: "${{ github.workspace }}/specification_document-releases/2_0-Metabolomics-Release" | |
| # referencing $DOC_IN did not want to work, maybe there is a better way | |
| DOC_OUT: "${{ github.workspace }}/specification_document-releases/2_0-Metabolomics-Release/output" | |
| DOC_FILE: 'mzTab_format_specification_2_0-M_release.adoc' | |
| jobs: | |
| build-spec: | |
| runs-on: '${{ matrix.os }}' | |
| strategy: | |
| matrix: | |
| os: | |
| - ubuntu-22.04 | |
| steps: | |
| - name: Set Build timestamp | |
| run: | | |
| echo "BUILD_DATE=$(date -u)" >> $GITHUB_ENV | |
| - uses: actions/checkout@v2 | |
| - run: sudo apt-get update -qq | |
| - run: sudo apt-get install -y pandoc | |
| - run: mkdir -p output | |
| - run: 'docker pull asciidoctor/docker-asciidoctor:1' | |
| - name: Build spec doc outputs | |
| run: | | |
| ./build-docs.sh -i "$DOC_IN" -o "$DOC_OUT" -c "$GITHUB_SHA" -d "$BUILD_DATE" -f "$DOC_FILE" | |
| shell: bash | |
| - run: mkdir output/2_0-metabolomics-release | |
| - run: cp -v -R $DOC_OUT/* output/2_0-metabolomics-release | |
| - run: mkdir -p output/2_0-metabolomics-release/img | |
| - run: cp -v -R $DOC_OUT/img/* output/2_0-metabolomics-release/img | |
| - run: cp -v -R docs/* output/ | |
| - name: Archive document build output | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: output artefacts | |
| path: | | |
| output/2_0-metabolomics-release/*.pdf | |
| output/2_0-metabolomics-release/*.html | |
| output/2_0-metabolomics-release/*.docx |