1.0.8-yeast-2

fixed YeastGSE61888 loader class assignment

1.0.8-yeast

various changes to yeast data sources including:

• refactoring STRING for human and yeast usage
• refactoring SGD
• new yeast graph spec

new cli options for generating meta kgs, test data, or dumps from simple files

1.0.8-test

Implemented Meta KG creation using jsonl files instead of cypher calls,
Added edge attributes and qualifiers to Meta KG

1.0.7-4

• hetio filters out medline co-ocurrence edges now

1.0.7-3

• restructured ubergraph to share one parser and added ubergraph redundant as an automat
• added node descriptions to ubergraph
• updated automat graph descriptions and names

1.0.7-2

• updated CAM KP to be able to find latest version, switched to on disk merging for CAM KP
• removed HTTP PROXY from helm charts

1.0.7-1

• updated property in cam kp and it's inclusion in the graph spec
• fixed a logger bug in ubergraph

1.0.7

These changes from the last pre-release:
added graph name, description and URL to graph spec
added env var for output URL so that a neo4j dump URL is created for the metadata
added output_format to graph spec so that optionally certain graphs create neo4j dumps while others dont
implemented first pass at QC sweep which finds a list of primary knowledge sources, edge properties, and predicate counts

Plus:
fixed provenance for ubergraph and ontological hierarchy
added score field from PHAROS for disgenet edges
added CAM KP

v1.0.7-test

testing release for changes to metadata and qc

• added graph name, description and URL to graph spec
• added env var for output URL so that a neo4j dump URL is created for the metadata
• added output_format to graph spec so that optionally certain graphs create neo4j dumps while others dont
• implemented first pass at QC sweep which finds a list of primary knowledge sources, edge properties, and predicate counts

1.0.6-4

refactored Viral Proteome,
fixed provenance for hetio