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[FIX] - Dependencies fix #2

[FIX] - Dependencies fix

[FIX] - Dependencies fix #2

Triggered via push February 26, 2024 18:23
Status Failure
Total duration 30m 26s
Artifacts 3
This run and associated checks have been archived and are scheduled for deletion. Learn more about checks retention

check-bioc.yml

on: push
Matrix: build-check
docker-build-and-push
0s

Annotations

9 errors and 47 warnings
windows-latest (4.3)
Running examples in 'scpGUI-Ex.R' failed
windows-latest (4.3)
cannot open the connection
windows-latest (4.3)
R CMD check found ERRORs
windows-latest (4.3)
Process completed with exit code 1.
ubuntu-latest (4.3)
Process completed with exit code 1.
macOS-latest (4.3)
Running examples in ‘scpGUI-Ex.R’ failed
macOS-latest (4.3)
cannot open the connection
macOS-latest (4.3)
R CMD check found ERRORs
macOS-latest (4.3)
Process completed with exit code 1.
windows-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.3)
replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::box' by 'shinydashboardPlus::box' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::messageItem' by 'shinydashboardPlus::messageItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardSidebar' by 'shinydashboardPlus::dashboardSidebar' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardPage' by 'shinydashboardPlus::dashboardPage' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::notificationItem' by 'shinydashboardPlus::notificationItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shiny::renderDataTable' by 'DT::renderDataTable' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::box' by 'shinydashboardPlus::box' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::messageItem' by 'shinydashboardPlus::messageItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardSidebar' by 'shinydashboardPlus::dashboardSidebar' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardPage' by 'shinydashboardPlus::dashboardPage' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::notificationItem' by 'shinydashboardPlus::notificationItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shiny::renderDataTable' by 'DT::renderDataTable' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::taskItem' by 'shinydashboardPlus::taskItem' when loading 'scpGUI'
windows-latest (4.3)
replacing previous import 'shinydashboard::dashboardHeader' by 'shinydashboardPlus::dashboardHeader' when loading 'scpGUI'
windows-latest (4.3)
Found the following significant warnings:
windows-latest (4.3)
Undocumented arguments in documentation object 'scpGUI'
ubuntu-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.3)
replacing previous import ‘shinydashboard::taskItem’ by ‘shinydashboardPlus::taskItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardHeader’ by ‘shinydashboardPlus::dashboardHeader’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::box’ by ‘shinydashboardPlus::box’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::messageItem’ by ‘shinydashboardPlus::messageItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardSidebar’ by ‘shinydashboardPlus::dashboardSidebar’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardPage’ by ‘shinydashboardPlus::dashboardPage’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::notificationItem’ by ‘shinydashboardPlus::notificationItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::taskItem’ by ‘shinydashboardPlus::taskItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardHeader’ by ‘shinydashboardPlus::dashboardHeader’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::taskItem’ by ‘shinydashboardPlus::taskItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardHeader’ by ‘shinydashboardPlus::dashboardHeader’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::box’ by ‘shinydashboardPlus::box’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::messageItem’ by ‘shinydashboardPlus::messageItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardSidebar’ by ‘shinydashboardPlus::dashboardSidebar’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardPage’ by ‘shinydashboardPlus::dashboardPage’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::notificationItem’ by ‘shinydashboardPlus::notificationItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shiny::renderDataTable’ by ‘DT::renderDataTable’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::taskItem’ by ‘shinydashboardPlus::taskItem’ when loading ‘scpGUI’
macOS-latest (4.3)
replacing previous import ‘shinydashboard::dashboardHeader’ by ‘shinydashboardPlus::dashboardHeader’ when loading ‘scpGUI’
macOS-latest (4.3)
Found the following significant warnings:
macOS-latest (4.3)
Undocumented arguments in documentation object 'scpGUI'

Artifacts

Produced during runtime
Name Size Digest
Linux-biocversion-RELEASE_3_18-r-4.3-results Expired
2.39 MB
sha256:e2824748cc2524900058ab9359f4b25901bf7510bc3a1583ac1aed7d5ba9d7e2
Windows-biocversion-RELEASE_3_18-r-4.3-results Expired
2.39 MB
sha256:607a69110dd5e84af963636cd99971a3c7f203bab7879b5b75ba2fc906f3f13b
macOS-biocversion-RELEASE_3_18-r-4.3-results Expired
2.4 MB
sha256:b8af9d0f66fedb121dc990fcd3b7477028a8aa2d0624c3a229f91a0bf7ce6cab