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Currently script must be used manually to provision ec2. ssh into the provided instance, and then execute 2 python scripts
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,183 +1,183 @@ | ||
| --- | ||
| name: Generate Data Usage Report | ||
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| on: | ||
| pull_request: | ||
| branches: | ||
| - main | ||
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| jobs: | ||
| generate-jobs-usage-report: | ||
| runs-on: ubuntu-latest | ||
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||
| steps: | ||
| - name: Configure AWS Credentials | ||
| uses: aws-actions/configure-aws-credentials@v3 | ||
| with: | ||
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | ||
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | ||
| aws-region: us-east-2 | ||
|
|
||
| - name: Launch EC2 Instance | ||
| id: launch_ec2 | ||
| run: | | ||
| INSTANCE_ID=$(aws ec2 run-instances \ | ||
| --image-id ami-088d38b423bff245f \ | ||
| --count 1 \ | ||
| --instance-type t3.micro \ | ||
| --key-name dandihub-gh-actions \ | ||
| --security-group-ids sg-0bf2dc1c2ff9c122e \ | ||
| --subnet-id subnet-0f544cca61ccd2804 \ | ||
| --tag-specifications "ResourceType=instance,Tags=[{Key=Name,Value=dandihub-gh-actions}]" \ | ||
| --query 'Instances[0].InstanceId' --output text) | ||
| echo "INSTANCE_ID=${INSTANCE_ID}" >> $GITHUB_ENV | ||
| - name: Wait for EC2 to Initialize | ||
| run: | | ||
| aws ec2 wait instance-status-ok --instance-ids ${{ env.INSTANCE_ID }} | ||
| - name: Allocate Elastic IP | ||
| id: allocate_eip | ||
| run: | | ||
| ALLOC_ID=$(aws ec2 allocate-address --query 'AllocationId' --output text) | ||
| echo "ALLOC_ID=${ALLOC_ID}" >> $GITHUB_ENV | ||
| - name: Associate Elastic IP with EC2 Instance | ||
| id: associate_eip | ||
| run: | | ||
| EIP=$(aws ec2 associate-address \ | ||
| --instance-id ${{ env.INSTANCE_ID }} \ | ||
| --allocation-id ${{ env.ALLOC_ID }} \ | ||
| --query 'AssociationId' --output text) | ||
| echo "EIP=${EIP}" >> $GITHUB_ENV | ||
| - name: Retrieve Elastic IP Address | ||
| id: get_ip | ||
| run: | | ||
| PUBLIC_IP=$(aws ec2 describe-addresses \ | ||
| --allocation-ids ${{ env.ALLOC_ID }} \ | ||
| --query 'Addresses[0].PublicIp' --output text) | ||
| echo "PUBLIC_IP=${PUBLIC_IP}" | ||
| echo "PUBLIC_IP=${PUBLIC_IP}" >> $GITHUB_ENV | ||
| - name: Execute df Command on EC2 | ||
| uses: appleboy/ssh-action@v0.1.6 | ||
| with: | ||
| host: ${{ env.PUBLIC_IP }} | ||
| username: ec2-user | ||
| key: ${{ secrets.EC2_SSH_KEY }} | ||
| script: | | ||
| echo "Running df command on EC2 instance..." | ||
| df -h | ||
| echo "Command completed." | ||
| continue-on-error: true # Allow the workflow to continue even if this step fails | ||
|
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||
|
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||
| - name: Terminate EC2 Instance | ||
| run: | | ||
| aws ec2 terminate-instances --instance-ids ${{ env.INSTANCE_ID }} | ||
| aws ec2 wait instance-terminated --instance-ids ${{ env.INSTANCE_ID }} | ||
| continue-on-error: true # Allow the workflow to continue even if this step fails | ||
|
|
||
| - name: Release Elastic IP | ||
| run: | | ||
| aws ec2 release-address --allocation-id ${{ env.ALLOC_ID }} | ||
| continue-on-error: true # Allow the workflow to continue even if this step fails | ||
|
|
||
| # jobs: | ||
| # generate_data_usage_report: | ||
| # runs-on: ubuntu-latest | ||
| # --- | ||
| # name: Generate Data Usage Report | ||
| # | ||
| # steps: | ||
| # on: | ||
| # pull_request: | ||
| # branches: | ||
| # - main | ||
| # | ||
| # - name: Log in to DockerHub | ||
| # uses: docker/login-action@v2 | ||
| # with: | ||
| # username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| # password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| # | ||
| # - name: Build and push Docker image | ||
| # uses: docker/build-push-action@v3 | ||
| # with: | ||
| # context: . | ||
| # file: images/Dockerfile.dandihub_report_generator | ||
| # push: true | ||
| # tags: ${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest | ||
| # jobs: | ||
| # generate-jobs-usage-report: | ||
| # runs-on: ubuntu-latest | ||
| # | ||
| # - name: Configure AWS credentials | ||
| # steps: | ||
| # - name: Configure AWS Credentials | ||
| # uses: aws-actions/configure-aws-credentials@v3 | ||
| # with: | ||
| # aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | ||
| # aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | ||
| # aws-region: us-east-2 | ||
| # | ||
| # - name: Assume ProvisioningRole | ||
| # - name: Launch EC2 Instance | ||
| # id: launch_ec2 | ||
| # run: | | ||
| # CREDS=$(aws sts assume-role --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} --role-session-name "GitHubActionsSession") | ||
| # export AWS_ACCESS_KEY_ID=$(echo $CREDS | jq -r '.Credentials.AccessKeyId') | ||
| # export AWS_SECRET_ACCESS_KEY=$(echo $CREDS | jq -r '.Credentials.SecretAccessKey') | ||
| # export AWS_SESSION_TOKEN=$(echo $CREDS | jq -r '.Credentials.SessionToken') | ||
| # INSTANCE_ID=$(aws ec2 run-instances \ | ||
| # --image-id ami-088d38b423bff245f \ | ||
| # --count 1 \ | ||
| # --instance-type t3.micro \ | ||
| # --key-name dandihub-gh-actions \ | ||
| # --security-group-ids sg-0bf2dc1c2ff9c122e \ | ||
| # --subnet-id subnet-0f544cca61ccd2804 \ | ||
| # --tag-specifications "ResourceType=instance,Tags=[{Key=Name,Value=dandihub-gh-actions}]" \ | ||
| # --query 'Instances[0].InstanceId' --output text) | ||
| # | ||
| # echo "INSTANCE_ID=${INSTANCE_ID}" >> $GITHUB_ENV | ||
| # | ||
| # - name: Configure kubectl with AWS EKS | ||
| # - name: Wait for EC2 to Initialize | ||
| # run: | | ||
| # aws eks update-kubeconfig --name eks-dandihub --region us-east-2 --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} | ||
| # aws ec2 wait instance-status-ok --instance-ids ${{ env.INSTANCE_ID }} | ||
| # | ||
| # # TODO remove | ||
| # - name: Sanity check | ||
| # - name: Allocate Elastic IP | ||
| # id: allocate_eip | ||
| # run: | | ||
| # kubectl get pods -n jupyterhub | ||
| # ALLOC_ID=$(aws ec2 allocate-address --query 'AllocationId' --output text) | ||
| # echo "ALLOC_ID=${ALLOC_ID}" >> $GITHUB_ENV | ||
| # | ||
| # # - name: Deploy Hello World Pod | ||
| # # run: | | ||
| # # kubectl apply -f .github/manifests/hello-world-pod.yaml | ||
| # # | ||
| # # - name: Wait for Hello World Pod to complete | ||
| # # run: | | ||
| # # kubectl wait --for=condition=Ready pod/hello-world-pod --timeout=300s # 5 minutes | ||
| # # continue-on-error: true # Allow the workflow to continue even if this step fails | ||
| # # | ||
| # # - name: Get Hello World Pod logs | ||
| # # run: | | ||
| # # kubectl logs hello-world-pod | ||
| # # if: ${{ success() }} # Only run this step if the previous step was successful | ||
| # # | ||
| # # - name: Delete Hello World Pod | ||
| # # run: | | ||
| # # kubectl delete pod hello-world-pod | ||
| # # if: ${{ always() }} # Always run this step, even if other steps fail | ||
| # # | ||
| # - name: Replace image placeholder in manifest | ||
| # - name: Associate Elastic IP with EC2 Instance | ||
| # id: associate_eip | ||
| # run: | | ||
| # sed -i 's|IMAGE_PLACEHOLDER|'"${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest"'|' .github/manifests/disk-usage-report-job.yaml | ||
| # EIP=$(aws ec2 associate-address \ | ||
| # --instance-id ${{ env.INSTANCE_ID }} \ | ||
| # --allocation-id ${{ env.ALLOC_ID }} \ | ||
| # --query 'AssociationId' --output text) | ||
| # echo "EIP=${EIP}" >> $GITHUB_ENV | ||
| # | ||
| # - name: Deploy Disk Usage Report Job | ||
| # - name: Retrieve Elastic IP Address | ||
| # id: get_ip | ||
| # run: | | ||
| # kubectl apply -f .github/manifests/disk-usage-report-job.yaml | ||
| # PUBLIC_IP=$(aws ec2 describe-addresses \ | ||
| # --allocation-ids ${{ env.ALLOC_ID }} \ | ||
| # --query 'Addresses[0].PublicIp' --output text) | ||
| # echo "PUBLIC_IP=${PUBLIC_IP}" | ||
| # echo "PUBLIC_IP=${PUBLIC_IP}" >> $GITHUB_ENV | ||
| # | ||
| # - name: Execute df Command on EC2 | ||
| # uses: appleboy/ssh-action@v0.1.6 | ||
| # with: | ||
| # host: ${{ env.PUBLIC_IP }} | ||
| # username: ec2-user | ||
| # key: ${{ secrets.EC2_SSH_KEY }} | ||
| # script: | | ||
| # echo "Running df command on EC2 instance..." | ||
| # df -h | ||
| # echo "Command completed." | ||
| # continue-on-error: true # Allow the workflow to continue even if this step fails | ||
| # | ||
| # | ||
| # # TODO should timeout be longer? | ||
| # - name: Wait for Disk Usage Report Job to complete | ||
| # - name: Terminate EC2 Instance | ||
| # run: | | ||
| # kubectl wait --for=condition=complete job/disk-usage-report-job --timeout=360s -n jupyterhub | ||
| # continue-on-error: true | ||
| # aws ec2 terminate-instances --instance-ids ${{ env.INSTANCE_ID }} | ||
| # aws ec2 wait instance-terminated --instance-ids ${{ env.INSTANCE_ID }} | ||
| # continue-on-error: true # Allow the workflow to continue even if this step fails | ||
| # | ||
| # # continue-on-error for previous steps so we delete the job | ||
| # - name: Delete Disk Usage Report Job | ||
| # - name: Release Elastic IP | ||
| # run: | | ||
| # kubectl delete job disk-usage-report-job -n jupyterhub | ||
| # aws ec2 release-address --allocation-id ${{ env.ALLOC_ID }} | ||
| # continue-on-error: true # Allow the workflow to continue even if this step fails | ||
| # | ||
| # # - name: Clone dandi-hub-usage-reports repository | ||
| # # run: | | ||
| # # git clone https://github.com/dandi/dandi-hub-usage-reports.git | ||
| # # | ||
| # # - name: Copy report file to repository, commit and push report | ||
| # # run: | | ||
| # # cd dandi-hub-usage-reports | ||
| # # DATE=$(date +'%Y-%m-%d') | ||
| # # mv ../du_report.json $DATE_du_report.json | ||
| # # git config --global user.name "GitHub Actions" | ||
| # # git config --global user.email "actions@github.com" | ||
| # # git add $DATE_du_report.json | ||
| # # git commit -m "Add disk usage report for $DATE" | ||
| # # git push https://${{ secrets.GITHUB_TOKEN }}@github.com/dandi/dandi-hub-usage-reports.git | ||
| # # jobs: | ||
| # # generate_data_usage_report: | ||
| # # runs-on: ubuntu-latest | ||
| # # | ||
| # # steps: | ||
| # # | ||
| # # - name: Log in to DockerHub | ||
| # # uses: docker/login-action@v2 | ||
| # # with: | ||
| # # username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| # # password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| # # | ||
| # # - name: Build and push Docker image | ||
| # # uses: docker/build-push-action@v3 | ||
| # # with: | ||
| # # context: . | ||
| # # file: images/Dockerfile.dandihub_report_generator | ||
| # # push: true | ||
| # # tags: ${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest | ||
| # # | ||
| # # - name: Configure AWS credentials | ||
| # # uses: aws-actions/configure-aws-credentials@v3 | ||
| # # with: | ||
| # # aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | ||
| # # aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | ||
| # # aws-region: us-east-2 | ||
| # # | ||
| # # - name: Assume ProvisioningRole | ||
| # # run: | | ||
| # # CREDS=$(aws sts assume-role --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} --role-session-name "GitHubActionsSession") | ||
| # # export AWS_ACCESS_KEY_ID=$(echo $CREDS | jq -r '.Credentials.AccessKeyId') | ||
| # # export AWS_SECRET_ACCESS_KEY=$(echo $CREDS | jq -r '.Credentials.SecretAccessKey') | ||
| # # export AWS_SESSION_TOKEN=$(echo $CREDS | jq -r '.Credentials.SessionToken') | ||
| # # | ||
| # # - name: Configure kubectl with AWS EKS | ||
| # # run: | | ||
| # # aws eks update-kubeconfig --name eks-dandihub --region us-east-2 --role-arn ${{ secrets.AWS_PROVISIONING_ROLE_ARN }} | ||
| # # | ||
| # # # TODO remove | ||
| # # - name: Sanity check | ||
| # # run: | | ||
| # # kubectl get pods -n jupyterhub | ||
| # # | ||
| # # # - name: Deploy Hello World Pod | ||
| # # # run: | | ||
| # # # kubectl apply -f .github/manifests/hello-world-pod.yaml | ||
| # # # | ||
| # # # - name: Wait for Hello World Pod to complete | ||
| # # # run: | | ||
| # # # kubectl wait --for=condition=Ready pod/hello-world-pod --timeout=300s # 5 minutes | ||
| # # # continue-on-error: true # Allow the workflow to continue even if this step fails | ||
| # # # | ||
| # # # - name: Get Hello World Pod logs | ||
| # # # run: | | ||
| # # # kubectl logs hello-world-pod | ||
| # # # if: ${{ success() }} # Only run this step if the previous step was successful | ||
| # # # | ||
| # # # - name: Delete Hello World Pod | ||
| # # # run: | | ||
| # # # kubectl delete pod hello-world-pod | ||
| # # # if: ${{ always() }} # Always run this step, even if other steps fail | ||
| # # # | ||
| # # - name: Replace image placeholder in manifest | ||
| # # run: | | ||
| # # sed -i 's|IMAGE_PLACEHOLDER|'"${{ secrets.DOCKERHUB_USERNAME }}/dandihub-report-generator:latest"'|' .github/manifests/disk-usage-report-job.yaml | ||
| # # | ||
| # # - name: Deploy Disk Usage Report Job | ||
| # # run: | | ||
| # # kubectl apply -f .github/manifests/disk-usage-report-job.yaml | ||
| # # | ||
| # # # TODO should timeout be longer? | ||
| # # - name: Wait for Disk Usage Report Job to complete | ||
| # # run: | | ||
| # # kubectl wait --for=condition=complete job/disk-usage-report-job --timeout=360s -n jupyterhub | ||
| # # continue-on-error: true | ||
| # # | ||
| # # # continue-on-error for previous steps so we delete the job | ||
| # # - name: Delete Disk Usage Report Job | ||
| # # run: | | ||
| # # kubectl delete job disk-usage-report-job -n jupyterhub | ||
| # # | ||
| # # # - name: Clone dandi-hub-usage-reports repository | ||
| # # # run: | | ||
| # # # git clone https://github.com/dandi/dandi-hub-usage-reports.git | ||
| # # # | ||
| # # # - name: Copy report file to repository, commit and push report | ||
| # # # run: | | ||
| # # # cd dandi-hub-usage-reports | ||
| # # # DATE=$(date +'%Y-%m-%d') | ||
| # # # mv ../du_report.json $DATE_du_report.json | ||
| # # # git config --global user.name "GitHub Actions" | ||
| # # # git config --global user.email "actions@github.com" | ||
| # # # git add $DATE_du_report.json | ||
| # # # git commit -m "Add disk usage report for $DATE" | ||
| # # # git push https://${{ secrets.GITHUB_TOKEN }}@github.com/dandi/dandi-hub-usage-reports.git |