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@getwilds

Fred Hutch Data Science Lab WILDS

The new home of the DaSL WILDS (Workflows for Integration of Large Data and Software)
README.md

Welcome to the Fred Hutch Cancer Center Data Science Lab's open source software resource, getwilds (get Workflows Integrating Large Data and Software). We hope you like it here.

See our emerging website at getwilds.org and stay tuned for more as we get this effort off the ground!

Find out more about the Data Science Lab at hutchdatascience.org

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  1. sixtyfour sixtyfour Public

    🚚 AWS for Data Scientists

    R 19 2

  2. cancerprof cancerprof Public

    API Client for State Cancer Profiles

    R 2 3

  3. wilds-docker-library wilds-docker-library Public

    Collection of Docker images for use in WILDS bioinformatics workflows

    Dockerfile 2 3

Repositories

Showing 10 of 35 repositories
  • getwilds.github.io Public

    WILDS Website

    getwilds/getwilds.github.io’s past year of commit activity
    Lua 0 CC0-1.0 0 5 0 Updated May 16, 2025
  • registry Public

    WILDS Repo Registry

    getwilds/registry’s past year of commit activity
    Python 0 0 1 0 Updated May 16, 2025
  • ww-star Public

    WILDS WDL module for RNAseq alignment using STAR

    getwilds/ww-star’s past year of commit activity
    WDL 0 MIT 0 0 1 Updated May 14, 2025
  • dasl-quarto Public

    Quarto template for FHCC DaSL HTML report

    getwilds/dasl-quarto’s past year of commit activity
    HTML 0 0 0 2 Updated May 13, 2025
  • ww-cnvkit Public

    WILDS WDL module for CNV detection using CNVkit

    getwilds/ww-cnvkit’s past year of commit activity
    WDL 0 MIT 0 0 0 Updated May 12, 2025
  • ww-star-deseq2 Public

    WILDS WDL workflow that executes STAR+DESeq2 on RNAseq data

    getwilds/ww-star-deseq2’s past year of commit activity
    WDL 0 MIT 0 1 0 Updated May 12, 2025
  • ww-sra Public

    WILDS WDL module for downloading genomic data using the SRA toolkit

    getwilds/ww-sra’s past year of commit activity
    WDL 0 MIT 0 2 0 Updated May 10, 2025
  • wilds-docker-library Public

    Collection of Docker images for use in WILDS bioinformatics workflows

    getwilds/wilds-docker-library’s past year of commit activity
    Dockerfile 2 MIT 3 4 3 Updated May 9, 2025
  • ww-saturation Public

    Self-contained WDL workflow that performs saturation mutagenesis analysis

    getwilds/ww-saturation’s past year of commit activity
    WDL 0 MIT 2 0 0 Updated Apr 14, 2025
  • sixtyfour Public

    🚚 AWS for Data Scientists

    getwilds/sixtyfour’s past year of commit activity
    R 19 2 28 2 Updated Apr 10, 2025
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