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19 Open 81 Closed
19 Open 81 Closed
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Issues list

Error in rule create_cov_bed module pyd4 not found
#233 opened Dec 13, 2024 by tito-abbo
2
Rule collect_sumstats Error.
#232 opened Dec 9, 2024 by ChabbyTMD
6
Unknown errors with big datasets
#229 opened Nov 5, 2024 by max-hence
1
default resources runtime issue
#227 opened Oct 24, 2024 by elizakirsch0
6
all-sites VCF question
#223 opened Sep 23, 2024 by AndreMonc
10
Segmentation Error with ecoli test set. However test set ci, runs fine
#221 opened Sep 16, 2024 by msinclair-sudo
DB2vcf / CombineGVCFs error out with MNPs
#219 opened Sep 4, 2024 by shelbirussell
Starting from arbitrary VCFs
#218 opened Aug 24, 2024 by andreaswallberg
3
Compatibility issue with Python and cov_filter
#216 opened Aug 14, 2024 by elizakirsch0
12
Error in concat_gvcfs
#214 opened Aug 6, 2024 by exkahn
4
restricting variant calls
#208 opened Jun 17, 2024 by TonyKess
3
Error with big dataset and slurm
#198 opened May 29, 2024 by max-hence
4
qc html
#195 opened May 16, 2024 by jasonwjohns
8
Adding additional samples to pipeline
#190 opened May 6, 2024 by ruthrivkin
2
feature request: give a bcftools option
#186 opened Apr 25, 2024 by andrewkern
1
Add snp density visualization to QC module enhancement New feature or request lowpriority On the roadmap, but not likely to be addressed soon
#109 opened Jun 5, 2023 by tsackton
sort/gather step fails with high interval count
#87 opened Dec 14, 2022 by tsackton
1
Longer Term Roadmap enhancement New feature or request lowpriority On the roadmap, but not likely to be addressed soon
#17 opened Aug 6, 2021 by tsackton
Automatically determine correct coverage parameters enhancement New feature or request lowpriority On the roadmap, but not likely to be addressed soon
#15 opened Aug 6, 2021 by tsackton
1
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