Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Finalize n_species, deprecate/defunct other functions, add CITATION.cff #346

Merged
merged 34 commits into from
Dec 24, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
34 commits
Select commit Hold shift + click to select a range
418eca4
Deprecate `get_species()`
damianooldoni Oct 30, 2024
d7a0151
Compile changes in affiliation authors
damianooldoni Oct 30, 2024
f89cf0b
Create CITATION.cff
damianooldoni Nov 20, 2024
4f81d23
Use only event based obs
damianooldoni Nov 20, 2024
e2cd789
Test deprecation get_species
damianooldoni Nov 20, 2024
0a0e7e5
Simplify tests without losing test power
damianooldoni Nov 20, 2024
916df16
Update CITATION and ignore it while building
damianooldoni Nov 20, 2024
f8c899f
devtools::document()
damianooldoni Nov 20, 2024
b25eadb
Defunct: check_species() and get_scientific_name()
damianooldoni Nov 20, 2024
25f5846
InheritParams from n_species
damianooldoni Nov 20, 2024
a2de988
Inherit from its non deprecated function
damianooldoni Nov 20, 2024
a2e829d
Remove species as arg to filter on
damianooldoni Nov 20, 2024
6f4edcd
Use term `column` instead of `field`
damianooldoni Nov 20, 2024
859d96d
Remove typo
damianooldoni Nov 20, 2024
12b7432
Obsolete comment in documentation
damianooldoni Nov 20, 2024
ae10d93
devtools::document()
damianooldoni Nov 20, 2024
2155752
Call non deprecated function
damianooldoni Nov 20, 2024
e57f761
Check defunct functions
damianooldoni Nov 20, 2024
d8a0883
Sharp deprecation test using regexp
damianooldoni Nov 20, 2024
b0a6aa6
devtools::document()
damianooldoni Nov 20, 2024
ebc9f01
Add CITATION to NEWS.md
damianooldoni Nov 20, 2024
c321d66
Remove filtering in function
damianooldoni Nov 20, 2024
442b034
Capitalize comments
damianooldoni Nov 20, 2024
28ae966
Use `filter_observations()`
damianooldoni Dec 13, 2024
5d87b28
Improve comment
damianooldoni Dec 13, 2024
68834d2
Remove redundant filter()
damianooldoni Dec 13, 2024
328a573
Use observations(x)
damianooldoni Dec 13, 2024
9433cb5
Improve comment: NA is counted as species
damianooldoni Dec 13, 2024
0fd5a07
Explain why using mutate() for removing NA from count
damianooldoni Dec 13, 2024
1f4fffe
Improve codestyle
damianooldoni Dec 13, 2024
ecc7f8a
Remove redundant variable
damianooldoni Dec 13, 2024
0cea4cd
Add test: media-based obs not used for species counting
damianooldoni Dec 13, 2024
1003489
Test always content of `deploymentID` col output
damianooldoni Dec 13, 2024
d06a35c
Capitalize comments
damianooldoni Dec 13, 2024
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -6,3 +6,4 @@
^docs$
^pkgdown$
^README\.Rmd$
^CITATION\.cff$
Loading