Skip to content
@okadalabipr

Okada Lab

Laboratory for Cell Systems, Institute for Protein Research, Osaka University

Pinned Loading

  1. biomass Public

    Forked from biomass-dev/biomass

    A Python Framework for Modeling and Analysis of Signaling Systems

    Python 1 1

  2. pasmopy Public

    Forked from pasmopy/pasmopy

    Patient-Specific Modeling in Python

    Python

  3. ASURAT Public

    Forked from keita-iida/ASURAT

    ASURAT: functional annotation-driven unsupervised clustering of single-cell transcriptomes

    R 1

Repositories

Showing 10 of 30 repositories
  • text2model-from-knowledge Public

    Extending BioMASS to construct mathematical models from external knowledge (Arakane et al., 2024)

    Python 0 Apache-2.0 1 0 0 Updated Feb 8, 2025
  • cREscENDO Public
    Python 0 MIT 1 0 0 Updated Nov 28, 2024
  • DynProfiler Public Forked from Masaaaato/DynProfiler
    Jupyter Notebook 0 1 0 0 Updated Oct 9, 2024
  • HER2_Cellcycle Public
    R 0 0 0 0 Updated May 30, 2024
  • Haga2023 Public
    R 1 MIT 0 0 0 Updated Jan 24, 2024
  • periodontitis Public
    Python 1 0 0 0 Updated Jun 8, 2023
  • inflammatory-aging Public

    Tabata, S. et al.

    R 0 MIT 0 0 0 Updated Mar 9, 2023
  • BioMASS.jl Public Forked from biomass-dev/BioMASS.jl

    Julia interface to BioMASS, tailored to parameter estimation in systems biology models

    Julia 0 MIT 2 0 0 Updated Feb 28, 2023
  • biomass Public Forked from biomass-dev/biomass

    A Python Framework for Modeling and Analysis of Signaling Systems

    Python 1 Apache-2.0 13 0 0 Updated Feb 17, 2023
  • pasmopy Public Forked from pasmopy/pasmopy

    Patient-Specific Modeling in Python

    Python 0 Apache-2.0 7 0 0 Updated Feb 16, 2023
View all repositories