Utrecht University

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278 repositories

wildlifenl-research
Public
TypeScript
•
BSD 3-Clause "New" or "Revised" License
•0•0•14•3•Updated Jan 17, 2025Jan 17, 2025
yoda-ruleset
Public
iRODS ruleset and policies for Yoda: https://github.com/UtrechtUniversity/yoda
python yoda irods
Python
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GNU General Public License v3.0
•13•9•0•2•Updated Jan 17, 2025Jan 17, 2025
yoda-portal
Public
Web portal for Yoda: https://github.com/UtrechtUniversity/yoda
python flask yoda irods
JavaScript
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GNU General Public License v3.0
•13•10•0•4•Updated Jan 17, 2025Jan 17, 2025
yoda
Public
A system for reliable, long-term storing and archiving large amounts of research data during all stages of a study.
ansible data research yoda irods automated-deployment utrecht-university
HTML
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GNU General Public License v3.0
•26•46•48•4•Updated Jan 17, 2025Jan 17, 2025
epos-msl
Public
EPOS Multi-scale laboratories CKAN deployment
redis ansible solr postgresql ckan apache2 epos
Jinja
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GNU General Public License v3.0
•2•7•0•0•Updated Jan 17, 2025Jan 17, 2025
msl_api
Public
PHP
•1•0•0•8•Updated Jan 17, 2025Jan 17, 2025
workshop-introduction-to-R-and-data
Public
Material for the workshop 'Introduction to R & data'
HTML
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Creative Commons Attribution 4.0 International
•13•28•2•0•Updated Jan 16, 2025Jan 16, 2025
researchcloud-items
Public
Installation scripts for SURF ResearchCloud catalog components
ansible-role research-cloud
Jinja
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GNU General Public License v3.0
•4•8•13•2•Updated Jan 16, 2025Jan 16, 2025
galaxy-tools-ibridges
Public
iBridges-based tools for Galaxy to interact with iRODS/YODA
Python
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MIT License
•0•0•1•0•Updated Jan 16, 2025Jan 16, 2025
workshop-computational-reproducibility
Public
Material for the workshop 'Best Practices for Writing Reproducible Code'
SCSS
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Other
•13•10•19•0•Updated Jan 16, 2025Jan 16, 2025
wildlifenl
Public
Back-end API for the WildlifeNL project.
Go
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Mozilla Public License 2.0
•0•0•12•0•Updated Jan 16, 2025Jan 16, 2025
momentum-dataflow
Public
Repository for publishing website about data management practices of the Momentum project
data datamanagement datageneration
HTML
•0•0•0•0•Updated Jan 16, 2025Jan 16, 2025
BioSecure_Task3.2_Swine_Model
Public
Jupyter Notebook
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MIT License
•0•0•1•0•Updated Jan 15, 2025Jan 15, 2025
ricgraph
Public
Ricgraph - Research in context graph
visualization metadata enrichment graph linked-data harvest knowledge-graph harvest-data graph-database harvester
Python
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MIT License
•4•27•0•0•Updated Jan 15, 2025Jan 15, 2025
dataQuest
Public
A configurable pipeline for extracting and filtering articles from large corpora, tailored for the Delpher Kranten corpus, with support for features like keyword filtering and tf-idf-based relevance scoring.
information-retrieval corpus-processing article-extraction keyword-filtering delpher-kranten
Python
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MIT License
•0•1•1•0•Updated Jan 15, 2025Jan 15, 2025
src-component-galaxy
Public
Galaxy Workflow manager for SURF Research Cloud
Jinja
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GNU Lesser General Public License v2.1
•3•0•4•0•Updated Jan 14, 2025Jan 14, 2025
UU-dissertation-template
Public template
This is a Utrecht University dissertation template for LaTeX
latex-template phd-thesis-template utrecht-university dissertation-template
TeX
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MIT License
•3•15•4•0•Updated Jan 14, 2025Jan 14, 2025
CWCGG-2025-01-14Z
Public archive
Repository for teaching forks, branching, pull requests, and properly collaboratively writing code
Python
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MIT License
•1•0•0•0•Updated Jan 14, 2025Jan 14, 2025
CWCGG-2025-01-14A
Public archive
Repository for teaching forks, branching, pull requests, and properly collaboratively writing code
Python
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MIT License
•0•0•0•0•Updated Jan 14, 2025Jan 14, 2025
msl_ckan_util
Public
Python
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GNU Affero General Public License v3.0
•0•0•0•0•Updated Jan 14, 2025Jan 14, 2025
msl_ckan_core
Public
JavaScript
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GNU Affero General Public License v3.0
•1•0•0•0•Updated Jan 14, 2025Jan 14, 2025
CWCGG-docenttest
Public
Python
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MIT License
•2•0•0•1•Updated Jan 13, 2025Jan 13, 2025
raster_extraction
Public
Python
•0•0•0•0•Updated Jan 13, 2025Jan 13, 2025
SRC-test-workspace
Public
Packer definitions and scripts for generating containers and VMs mimicking SURF Research Cloud workspaces.
research-cloud
HCL
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MIT License
•0•3•7•0•Updated Jan 13, 2025Jan 13, 2025
dataprivacyhandbook
Public
Repository for the Data Privacy Handbook @UtrechtUniversity, a practical guide on handling personal data in scientific research
privacy research open-science research-data-management rdm gdpr utrecht-university
HTML
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Other
•7•11•7•0•Updated Jan 10, 2025Jan 10, 2025
open-textbooks
Public
Repository to create an open textbook about creating open textbooks with Quarto, hosted on GitHub
oer quarto open-educational-resource open-textbook
HTML
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Creative Commons Attribution 4.0 International
•1•2•1•0•Updated Jan 9, 2025Jan 9, 2025
code-carbon-r
Public
Implementation of CodeCarbon (python) in R-based workflows to measure the energy consumption and carbon footprint of individual snippets of code, scripts, and rendered documents (i.e., Rmd/QMD). This work is a contribution to the pilot Green Digital Skills workshop developed by the Netherlands eScience center.
R
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MIT License
•0•0•0•0•Updated Jan 8, 2025Jan 8, 2025
containerplatform-docs
Public
Container Platform public documentation
Dockerfile
•0•1•0•0•Updated Jan 7, 2025Jan 7, 2025
PBfR_stats
Public
Code for creating a Quarto report of the Privacy Basics for Researchers module stats
HTML
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MIT License
•0•0•1•0•Updated Jan 6, 2025Jan 6, 2025
yoda-clienttools
Public
Client-side Yoda tools - mainly intended for data managers and key users
yoda
Python
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GNU General Public License v3.0
•2•1•0•0•Updated Dec 24, 2024Dec 24, 2024