sanderlab

All

9 repositories

scPerturb
Public
scPerturb: A resource and a python/R tool for single-cell perturbation data
python science r statistics database scrna-seq single-cell perturbation cite-seq scatac-seq
Jupyter Notebook
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Other
•7•114•10•0•Updated Feb 25, 2025Feb 25, 2025
cellbox_torch
Public
CellBox: Interpretable Machine Learning for Perturbation Biology
Jupyter Notebook
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MIT License
•23•0•0•0•Updated Nov 8, 2024Nov 8, 2024
sanderlab.github.io
Public
sanderlab.org Website (https://sanderlab.github.io)
0•0•0•0•Updated Aug 21, 2024Aug 21, 2024
AlignmentViewer2.0
Public
TypeScript
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MIT License
•5•21•8•26•Updated May 15, 2024May 15, 2024
3Dseq
Public
Python
•0•7•0•0•Updated Nov 15, 2023Nov 15, 2023
CellBox
Public
CellBox: Interpretable Machine Learning for Perturbation Biology
Jupyter Notebook
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MIT License
•23•53•13•3•Updated Jul 27, 2023Jul 27, 2023
tumorcomparer
Public
A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.
HTML
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Other
•4•13•5•0•Updated Jan 31, 2023Jan 31, 2023
alignmentviewer
Public
Multiple sequence alignment visualizer
javascript html js protein alignment sequence-alignment msa multiple-sequence-alignment
JavaScript
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MIT License
•6•29•23•7•Updated Jan 26, 2023Jan 26, 2023
playing_with_alignv2
Public
JavaScript
•0•0•0•0•Updated Jan 16, 2020Jan 16, 2020