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nadeemlab / DeepLIIF

Star 191

Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

deep-learning pytorch stitching segmentation datasets image-segmentation multiplex super-resolution immunohistochemical-images cell-segmentation digital-pathology pathology whole-slide-imaging cell-biology cloud-native-applications multitask-learning pathology-image pathology-gan immunohistochemistry ai-ready
  • Updated Apr 18, 2025
  • Python

Materials-Data-Science-and-Informatics / awesome-fair

Star 34

A curated list of awesome stuff around the FAIR principles for (scientific) data, i.e that data is findable, accessable, interoperable and re-usable.

metadata data-science awesome provenance fdo interoperability awesome-list fair research-data-management metadata-standard research-data metadata-management metadata-information fair-principles data-provenance digital-objects fair-digital-objects ai-ready
  • Updated Aug 23, 2023

sandy-sp / gittxt

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Gittxt is an AI-focused CLI and plugin tool for extracting, filtering, and packaging text from GitHub repos. Build LLM-compatible datasets, prep code for prompt engineering, and power AI workflows with structured .txt, .json, .md, or .zip outputs.

text-extraction developer-tools structured-data data-pipeline cli-tool ai-ready open-source-llm llm-dataset ai-preprocessing repo-analysis github-scanner prompt-data code-to-llm
  • Updated Apr 18, 2025
  • Python

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