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Achievement: Starstruck

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Achievement: Starstruck

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  1. COPD_multiomics COPD_multiomics Public

    This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interaction in Chronic Obstructive Pulmonary Disease'.

    R 30 12

  2. population_airway_microbiome population_airway_microbiome Public

    This repository contains original codes for major analyses in the manuscript 'The multi-kingdom airway microbiome mediates the interaction between environmental exposure and respiratory health'.

    R 9 4

  3. COPD_metaanalysis COPD_metaanalysis Public

    This depository contains key scripts used to analyze the data in the manuscript "Multi-omic meta-analysis identifies functional signatures of airway microbiome in COPD" by Wang et al.

    Perl 5 7

  4. Strain_ID_FL16S Strain_ID_FL16S Public

    An automated pipeline for strain identification using Pacbio full-length 16S data

    Perl 2 1

  5. AERIS_MAP_BEAT_analysis AERIS_MAP_BEAT_analysis Public

    This repository contains perl and R scripts used to analyze the airway microbiome data for AERIS, COPDMAP and BEAT-COPD cohorts.

    Perl 1 1

  6. COPD_Resistome COPD_Resistome Public

    This repository contains pipeline for the resistome analysis on sputum metagenomic data for COPD patients, as well as related R scripts for data visualization.

    R