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Update global jdas enkf diag job with COMIN/COMOUT for COM prefix #2959

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merged 19 commits into from
Oct 30, 2024
Merged

Update global jdas enkf diag job with COMIN/COMOUT for COM prefix #2959

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79d4199
Changed COM_ into COMIN_ or COMOUT_
mingshichen-noaa Sep 24, 2024
7ffb76b
changing COM_ATMOS into COMOUT_ATMOS
mingshichen-noaa Sep 24, 2024
455f955
changing COMOUT_ATMOS_ANALYSIS_DET_PREV into COMIN_ATMOS_ANALYSIS_DET…
mingshichen-noaa Sep 25, 2024
a7df182
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Sep 25, 2024
0ddb9fa
changing COMIN_STMOS_ANALYSIS into COMOUT
mingshichen-noaa Sep 25, 2024
c55c863
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Sep 26, 2024
9dab65d
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 1, 2024
268190e
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 7, 2024
2e83482
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 10, 2024
ce6ef56
change COM_ into COMOUT in JGDAS_ATMOS_ANALYSIS_DIAG
mingshichen-noaa Oct 15, 2024
032ff6c
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 15, 2024
aa7d8a2
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 16, 2024
c9a50a4
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 18, 2024
ea7dc55
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 22, 2024
84f3e50
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 22, 2024
2f28a71
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 23, 2024
9e1d951
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 29, 2024
533b8f2
add _TMPL onto COM_ATMOS_ANALYSIS
Oct 29, 2024
04bbf9b
Merge branch 'develop' into feature/jdas_enkf_diag_com_in_out
mingshichen-noaa Oct 30, 2024
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5 changes: 3 additions & 2 deletions jobs/JGDAS_ATMOS_ANALYSIS_DIAG
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Original file line number Diff line number Diff line change
Expand Up @@ -27,8 +27,9 @@ export OPREFIX="${RUN/enkf}.t${cyc}z."
export GPREFIX="${GDUMP}.t${gcyc}z."
export APREFIX="${RUN}.t${cyc}z."

YMD=${PDY} HH=${cyc} declare_from_tmpl -rx COM_ATMOS_ANALYSIS
mkdir -m 775 -p "${COM_ATMOS_ANALYSIS}"
YMD=${PDY} HH=${cyc} declare_from_tmpl -rx \
COMOUT_ATMOS_ANALYSIS:COM_ATMOS_ANALYSIS
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mkdir -m 775 -p "${COMOUT_ATMOS_ANALYSIS}"

###############################################################
# Run relevant script
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48 changes: 25 additions & 23 deletions jobs/JGDAS_ENKF_DIAG
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Original file line number Diff line number Diff line change
Expand Up @@ -30,56 +30,58 @@ export APREFIX="${RUN}.t${cyc}z."
export GPREFIX="${GDUMP_ENS}.t${gcyc}z."
GPREFIX_DET="${GDUMP}.t${gcyc}z."

RUN=${RUN/enkf} YMD=${PDY} HH=${cyc} declare_from_tmpl -rx COM_OBS
MEMDIR="ensstat" YMD=${PDY} HH=${cyc} declare_from_tmpl -rx COM_ATMOS_ANALYSIS
RUN=${RUN/enkf} YMD=${PDY} HH=${cyc} declare_from_tmpl -rx \
COMIN_OBS:COM_OBS_TMPL
MEMDIR="ensstat" YMD=${PDY} HH=${cyc} declare_from_tmpl -rx \
COMOUT_ATMOS_ANALYSIS:COM_ATMOS_ANALYSIS_TMPL

RUN=${GDUMP} YMD=${gPDY} HH=${gcyc} declare_from_tmpl -rx \
COM_OBS_PREV:COM_OBS_TMPL \
COM_ATMOS_ANALYSIS_DET_PREV:COM_ATMOS_ANALYSIS_TMPL
COMIN_OBS_PREV:COM_OBS_TMPL \
COMIN_ATMOS_ANALYSIS_DET_PREV:COM_ATMOS_ANALYSIS_TMPL

MEMDIR="ensstat" RUN=${GDUMP_ENS} YMD=${gPDY} HH=${gcyc} declare_from_tmpl -rx \
COM_ATMOS_HISTORY_PREV:COM_ATMOS_HISTORY_TMPL
COMIN_ATMOS_HISTORY_PREV:COM_ATMOS_HISTORY_TMPL


export ATMGES_ENSMEAN="${COM_ATMOS_HISTORY_PREV}/${GPREFIX}atmf006.ensmean.nc"
export ATMGES_ENSMEAN="${COMIN_ATMOS_HISTORY_PREV}/${GPREFIX}atmf006.ensmean.nc"
if [ ! -f ${ATMGES_ENSMEAN} ]; then
echo "FATAL ERROR: FILE MISSING: ATMGES_ENSMEAN = ${ATMGES_ENSMEAN}"
exit 1
fi

# Link observational data
export PREPQC="${COM_OBS}/${OPREFIX}prepbufr"
export PREPQC="${COMIN_OBS}/${OPREFIX}prepbufr"
if [[ ! -f ${PREPQC} ]]; then
echo "WARNING: Global PREPBUFR FILE ${PREPQC} MISSING"
fi
export TCVITL="${COM_OBS}/${OPREFIX}syndata.tcvitals.tm00"
export TCVITL="${COMIN_OBS}/${OPREFIX}syndata.tcvitals.tm00"
if [[ ${DONST} = "YES" ]]; then
export NSSTBF="${COM_OBS}/${OPREFIX}nsstbufr"
export NSSTBF="${COMIN_OBS}/${OPREFIX}nsstbufr"
fi
export PREPQCPF="${COM_OBS}/${OPREFIX}prepbufr.acft_profiles"
export PREPQCPF="${COMIN_OBS}/${OPREFIX}prepbufr.acft_profiles"

# Guess Bias correction coefficients related to control
export GBIAS=${COM_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias
export GBIASPC=${COM_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias_pc
export GBIASAIR=${COM_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias_air
export GRADSTAT=${COM_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}radstat
export GBIAS=${COMIN_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias
export GBIASPC=${COMIN_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias_pc
export GBIASAIR=${COMIN_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}abias_air
export GRADSTAT=${COMIN_ATMOS_ANALYSIS_DET_PREV}/${GPREFIX_DET}radstat

# Bias correction coefficients related to ensemble mean
export ABIAS="${COM_ATMOS_ANALYSIS}/${APREFIX}abias.ensmean"
export ABIASPC="${COM_ATMOS_ANALYSIS}/${APREFIX}abias_pc.ensmean"
export ABIASAIR="${COM_ATMOS_ANALYSIS}/${APREFIX}abias_air.ensmean"
export ABIASe="${COM_ATMOS_ANALYSIS}/${APREFIX}abias_int.ensmean"
export ABIAS="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}abias.ensmean"
export ABIASPC="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}abias_pc.ensmean"
export ABIASAIR="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}abias_air.ensmean"
export ABIASe="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}abias_int.ensmean"

# Diagnostics related to ensemble mean
export GSISTAT="${COM_ATMOS_ANALYSIS}/${APREFIX}gsistat.ensmean"
export CNVSTAT="${COM_ATMOS_ANALYSIS}/${APREFIX}cnvstat.ensmean"
export OZNSTAT="${COM_ATMOS_ANALYSIS}/${APREFIX}oznstat.ensmean"
export RADSTAT="${COM_ATMOS_ANALYSIS}/${APREFIX}radstat.ensmean"
export GSISTAT="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}gsistat.ensmean"
export CNVSTAT="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}cnvstat.ensmean"
export OZNSTAT="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}oznstat.ensmean"
export RADSTAT="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}radstat.ensmean"

# Select observations based on ensemble mean
export RUN_SELECT="YES"
export USE_SELECT="NO"
export SELECT_OBS="${COM_ATMOS_ANALYSIS}/${APREFIX}obsinput.ensmean"
export SELECT_OBS="${COMOUT_ATMOS_ANALYSIS}/${APREFIX}obsinput.ensmean"

export DIAG_SUFFIX="_ensmean"
export DIAG_COMPRESS="NO"
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10 changes: 5 additions & 5 deletions scripts/exglobal_diag.sh
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Expand Up @@ -49,10 +49,10 @@ SENDDBN=${SENDDBN:-"NO"}

# Analysis files
export APREFIX=${APREFIX:-""}
RADSTAT=${RADSTAT:-${COM_ATMOS_ANALYSIS}/${APREFIX}radstat}
PCPSTAT=${PCPSTAT:-${COM_ATMOS_ANALYSIS}/${APREFIX}pcpstat}
CNVSTAT=${CNVSTAT:-${COM_ATMOS_ANALYSIS}/${APREFIX}cnvstat}
OZNSTAT=${OZNSTAT:-${COM_ATMOS_ANALYSIS}/${APREFIX}oznstat}
RADSTAT=${RADSTAT:-${COMOUT_ATMOS_ANALYSIS}/${APREFIX}radstat}
PCPSTAT=${PCPSTAT:-${COMOUT_ATMOS_ANALYSIS}/${APREFIX}pcpstat}
CNVSTAT=${CNVSTAT:-${COMOUT_ATMOS_ANALYSIS}/${APREFIX}cnvstat}
OZNSTAT=${OZNSTAT:-${COMOUT_ATMOS_ANALYSIS}/${APREFIX}oznstat}

# Remove stat file if file already exists
[[ -s $RADSTAT ]] && rm -f $RADSTAT
Expand All @@ -74,7 +74,7 @@ nm=""
if [ $CFP_MP = "YES" ]; then
nm=0
fi
DIAG_DIR=${DIAG_DIR:-${COM_ATMOS_ANALYSIS}/gsidiags}
DIAG_DIR=${DIAG_DIR:-${COMOUT_ATMOS_ANALYSIS}/gsidiags}
REMOVE_DIAG_DIR=${REMOVE_DIAG_DIR:-"NO"}

# Set script / GSI control parameters
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