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Linter fix quast #7152

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bernt-matthias
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FOR CONTRIBUTOR:

  • I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • License permits unrestricted use (educational + commercial)
  • This PR adds a new tool or tool collection
  • This PR updates an existing tool or tool collection
  • This PR does something else (explain below)

@bernt-matthias bernt-matthias marked this pull request as draft July 18, 2025 10:05
@bernt-matthias bernt-matthias marked this pull request as ready for review July 18, 2025 19:31
@bernt-matthias
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Feeling tempted to revert #5149. The case of individual assembly should be covered by using nested collections.

@bernt-matthias bernt-matthias marked this pull request as draft July 20, 2025 06:08
@bernt-matthias bernt-matthias marked this pull request as ready for review July 21, 2025 13:27
Co-authored-by: Saim Momin <64724322+SaimMomin12@users.noreply.github.com>
@bernt-matthias
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Since 242cc0a might be controversial I would like to get more feedback on this.

@bgruening
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puh, yeah controversial, but I'm ok with it ...

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@bernt-matthias I think we have no objections to this as such

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Lets ping the micogalaxy community

@bernt-matthias bernt-matthias marked this pull request as draft July 24, 2025 13:53
@bebatut
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bebatut commented Jul 30, 2025

I keep looking at this PR. It will for sure simplify things but I am also afraid it will break things and might be complicated for users (but probably just a matter of training 😅)
So I am ok with it

@bgruening
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@bernt-matthias if you have @bebatut blessing ... I guess you can proceed :)

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I planned to add a bit of documentation. Just found no time yet

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4 participants