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Add scGPT: Zero-shot application #20

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Add scGPT: Zero-shot application

Add scGPT: Zero-shot application #20

Triggered via pull request December 11, 2024 10:28
@sainirmayisainirmayi
synchronize #2
feature/no-ref/scgpt-zero-shot
Status Failure
Total duration 7m 44s
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test.yaml

on: pull_request
test  /  List components to test
28s
test / List components to test
Matrix: test / Test
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1 error and 17 warnings
test / Test (singler, methods, src/methods/singler/config.vsh.yaml, src/methods/singler/, r_script, meth...
Process completed with exit code 1.
test / List components to test
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test / Test (knn, methods, src/methods/knn/config.vsh.yaml, src/methods/knn/, python_script, methods/knn)
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test / Test (random_labels, control_methods, src/control_methods/random_labels/config.vsh.yaml, src/cont...
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test / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...
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test / Test (xgboost, methods, src/methods/xgboost/config.vsh.yaml, src/methods/xgboost/, python_script,...
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test / Test (mlp, methods, src/methods/mlp/config.vsh.yaml, src/methods/mlp/, python_script, methods/mlp)
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test / Test (naive_bayes, methods, src/methods/naive_bayes/config.vsh.yaml, src/methods/naive_bayes/, py...
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test / Test (accuracy, metrics, src/metrics/accuracy/config.vsh.yaml, src/metrics/accuracy/, python_scri...
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test / Test (singler, methods, src/methods/singler/config.vsh.yaml, src/methods/singler/, r_script, meth...
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
test / Test (logistic_regression, methods, src/methods/logistic_regression/config.vsh.yaml, src/methods/...
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test / Test (seurat_transferdata, methods, src/methods/seurat_transferdata/config.vsh.yaml, src/methods/...
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test / Test (true_labels, control_methods, src/control_methods/true_labels/config.vsh.yaml, src/control_...
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test / Test (majority_vote, control_methods, src/control_methods/majority_vote/config.vsh.yaml, src/cont...
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test / Test (f1, metrics, src/metrics/f1/config.vsh.yaml, src/metrics/f1/, python_script, metrics/f1)
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test / Test (scanvi, methods, src/methods/scanvi/config.vsh.yaml, src/methods/scanvi/, python_script, me...
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test / Test (scanvi_scarches, methods, src/methods/scanvi_scarches/config.vsh.yaml, src/methods/scanvi_s...
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test / Test (scgpt_zero_shot, methods, src/methods/scgpt_zero_shot/config.vsh.yaml, src/methods/scgpt_ze...
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636